RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 TUBB3Q13509 450 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 ATG14Q6ZNE5 492 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 ZNF534Q76KX8 674 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 MAP7D3Q8IWC1 876 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 C1orf127Q8N9H9 656 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 REPS2Q8NFH8 660 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 C2CD4BA6NLJ0 364 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 AOC1P19801 751 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 TCF7P36402 384 aaPredicted RBP18.02■□□□□ 0.48
TRAM1-201ENST00000262213 MSLNQ13421 630 aaPredicted RBP18.02■□□□□ 0.48
TRAM1-201ENST00000262213 TBCCQ15814 346 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 PPM1JQ5JR12 505 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 NBPF12Q5TAG4 269 aaPredicted RBP18.02■□□□□ 0.48
TRAM1-201ENST00000262213 MAP1SQ66K74 1059 aaPredicted RBP18.02■□□□□ 0.48
TRAM1-201ENST00000262213 KYAT3Q6YP21 454 aaKnown RBP18.02■□□□□ 0.48
TRAM1-201ENST00000262213 MARK2Q7KZI7 788 aaKnown RBP18.02■□□□□ 0.48
TRAM1-201ENST00000262213 C12orf29Q8N999 325 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 ATXN7L3BQ96GX2 97 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 PCDH18Q9HCL0 1135 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 BTBD7Q9P203 1132 aa18.02■□□□□ 0.48
TRAM1-201ENST00000262213 FAM159BA6NKW6 160 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 ENDOD1O94919 500 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 FGF3P11487 239 aaPredicted RBP18.02■□□□□ 0.47
TRAM1-201ENST00000262213 RAG1P15918 1043 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 GRIA2P42262 883 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 EFNA5P52803 228 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 SESN2P58004 480 aaPredicted RBP18.02■□□□□ 0.47
TRAM1-201ENST00000262213 MMEL1Q495T6 779 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 RABGAP1LQ5R372 815 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 ATF7IP2Q5U623 682 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 MBLAC2Q68D91 279 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 MAVSQ7Z434 540 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 C10orf107Q8IVU9 208 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 CLMNQ96JQ2 1002 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 PGLYRP2Q96PD5 576 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 EPAS1Q99814 870 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 SNRNP25Q9BV90 132 aaKnown RBP18.02■□□□□ 0.47
TRAM1-201ENST00000262213 CEP41Q9BYV8 373 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 KLHL4Q9C0H6 718 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 MAN1C1Q9NR34 630 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 EMCNQ9ULC0 261 aa18.02■□□□□ 0.47
TRAM1-201ENST00000262213 MGAMO43451 1857 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 FER1L6Q2WGJ9 1857 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 OR6B1O95007 311 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 CXCL9Q07325 125 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 CCDC14Q49A88 953 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 CES3Q6UWW8 571 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 C1orf21Q9H246 121 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 RNPEPQ9H4A4 650 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 OCEL1Q9H607 264 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 RPF1Q9H9Y2 349 aaKnown RBP18.01■□□□□ 0.47
TRAM1-201ENST00000262213 ZNF358Q9NW07 568 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 G3BP2Q9UN86 482 aaKnown RBP18.01■□□□□ 0.47
TRAM1-201ENST00000262213 BIRC5O15392 142 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 PGM3O95394 542 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 SPATA31D3P0C874 917 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 TFE3P19532 575 aaPredicted RBP18.01■□□□□ 0.47
TRAM1-201ENST00000262213 CYP3A5P20815 502 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 ATXN1P54253 815 aaKnown RBP18.01■□□□□ 0.47
TRAM1-201ENST00000262213 GRM1Q13255 1194 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 SURF1Q15526 300 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 TARBP2Q15633 366 aaKnown RBP18.01■□□□□ 0.47
TRAM1-201ENST00000262213 PDPK2PQ6A1A2 396 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 MPZL3Q6UWV2 235 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 SPATA31D4Q6ZUB0 917 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 ACAD11Q709F0 780 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 SATL1Q86VE3 508 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 NIM1KQ8IY84 436 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 PHTF2Q8N3S3 785 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 NMD3Q96D46 503 aaKnown RBP18.01■□□□□ 0.47
TRAM1-201ENST00000262213 PPP1R36Q96LQ0 422 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 TEX13BQ9BXU2 312 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 MIS12Q9H081 205 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 DMAP1Q9NPF5 467 aaPredicted RBP18.01■□□□□ 0.47
TRAM1-201ENST00000262213 CDH22Q9UJ99 828 aa18.01■□□□□ 0.47
TRAM1-201ENST00000262213 DCXO43602 365 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 MAFO75444 373 aaPredicted RBP18■□□□□ 0.47
TRAM1-201ENST00000262213 GSRP00390 522 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 ALDOAP04075 364 aaKnown RBP18■□□□□ 0.47
TRAM1-201ENST00000262213 ARRB2P32121 409 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 IDH3AP50213 366 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 PDE1CQ14123 709 aaPredicted RBP18■□□□□ 0.47
TRAM1-201ENST00000262213 JADE1Q6IE81 842 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18■□□□□ 0.47
TRAM1-201ENST00000262213 PPP4R1Q8TF05 950 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 GCNAQ96QF7 691 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 NDNQ99608 321 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 UBE2OQ9C0C9 1292 aaKnown RBP18■□□□□ 0.47
TRAM1-201ENST00000262213 ACSS2Q9NR19 701 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 MFHAS1Q9Y4C4 1052 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 PCDHA11Q9Y5I1 949 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 PSAT1Q9Y617 370 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 TRIP11Q15643 1979 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 CILPO75339 1184 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 VCLP18206 1134 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 USP4Q13107 963 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 DYNC1I2Q13409 638 aaKnown RBP18■□□□□ 0.47
TRAM1-201ENST00000262213 ARMC3Q5W041 872 aa18■□□□□ 0.47
TRAM1-201ENST00000262213 ARCQ7LC44 396 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms