RNA–Protein interactions for RNA: ENST00000262150.6

CDH19-201, Transcript of cadherin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH19, Length 6,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-201ENST00000262150 SIGLEC16A6NMB1 481 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 INPPL1O15357 1258 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 SYF2O95926 243 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 APODP05090 189 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 KCNE1P15382 129 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 RFC1P35251 1148 aaPredicted RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 TMPRSS15P98073 1019 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 MAPK8IP2Q13387 824 aaPredicted RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 SOWAHAQ2M3V2 549 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 MAP3K21Q5TCX8 1036 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 FOXR2Q6PJQ5 311 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 AGMOQ6ZNB7 445 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 SLC13A5Q86YT5 568 aaPredicted RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 TRIM48Q8IWZ4 208 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 LZTR1Q8N653 840 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 FLCNQ8NFG4 579 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 SPATA20Q8TB22 786 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 TMEM40Q8WWA1 233 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 CHMP6Q96FZ7 201 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 KREMEN1Q96MU8 473 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 TAS2R14Q9NYV8 317 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 RBAK-RBAKDNI3L0D1 243 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 O00370 1275 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 RASGRF2O14827 1237 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 EPHB6O15197 1021 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 DAB1O75553 588 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 CORO1AP31146 461 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 CENPCQ03188 943 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 POM121L1PQ3SYA9 428 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 E4F1Q66K89 784 aaPredicted RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 FBXL19Q6PCT2 694 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 RD3Q7Z3Z2 195 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 DNAJB7Q7Z6W7 309 aaPredicted RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 LINC00523Q86TU6 105 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 RNF135Q8IUD6 432 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 CFAP61Q8NHU2 1237 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 CDC26Q8NHZ8 85 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 PTPRN2Q92932 1015 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 SKA1Q96BD8 255 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 FOPNLQ96NB1 174 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 KCNK16Q96T55 309 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 HNRNPABQ99729 332 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 LPIN3Q9BQK8 851 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 TRIM51Q9BSJ1 452 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 RHOBTB2Q9BYZ6 727 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 UBP1Q9NZI7 540 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 MRPS17Q9Y2R5 130 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 CPQQ9Y646 472 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 LRRC10BA6NIK2 292 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 SERPINF2P08697 491 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 TAC1P20366 129 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 KCNA5P22460 613 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 BMPR1AP36894 532 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 RAD23BP54727 409 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 MARSP56192 900 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 POU5F1Q01860 360 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 UBXN2BQ14CS0 331 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 FASTKD1Q53R41 847 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 PTRHD1Q6GMV3 140 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 OTOP3Q7RTS5 596 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 MYRIPQ8NFW9 859 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 ATG4AQ8WYN0 398 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 APOL2Q9BQE5 337 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 CEP41Q9BYV8 373 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 CACYBPQ9HB71 228 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 AVENQ9NQS1 362 aaPredicted RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 TPX2Q9ULW0 747 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 AAR2Q9Y312 384 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 PAPPA2Q9BXP8 1791 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 STIP1P31948 543 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 MATKP42679 507 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 ZNF143P52747 638 aaPredicted RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 WDR5P61964 334 aaKnown RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 NOMO3P69849 1222 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 FMO1Q01740 532 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 MAMLD1Q13495 774 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 TTC31Q49AM3 519 aaPredicted RBP5.53□□□□□ -1.52
CDH19-201ENST00000262150 GRAMD4Q6IC98 578 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 EXD1Q8NHP7 514 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 WHAMMQ8TF30 809 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 FICDQ9BVA6 458 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 ADGRE3Q9BY15 652 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 ZYG11BQ9C0D3 744 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 MIR1-1HGQ9H1L0 117 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 LATS2Q9NRM7 1088 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 OGDHLQ9ULD0 1010 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.53□□□□□ -1.52
CDH19-201ENST00000262150 ASB3Q9Y575 518 aa5.53□□□□□ -1.52
CDH19-201ENST00000262150 GJA1P17302 382 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 FDFT1P37268 417 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 WASP42768 502 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 DEFB103AP81534 67 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 SLC12A1Q13621 1099 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 MOGSQ13724 837 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 B4GALNT4Q76KP1 1039 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 FAM126BQ8IXS8 530 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 SLC4A11Q8NBS3 891 aa5.52□□□□□ -1.53
CDH19-201ENST00000262150 SMG8Q8ND04 991 aaKnown RBP5.52□□□□□ -1.53
CDH19-201ENST00000262150 FUBP3Q96I24 572 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDH19-201ENST00000262150 PPP1R16AQ96I34 528 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms