RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 RANBP1P43487 201 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
SPG11-201ENST00000261866 PLD3Q8IV08 490 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 BBS2Q9BXC9 721 aa12.5□□□□□ -0.41
SPG11-201ENST00000261866 GSNP06396 782 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 FMO4P31512 558 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 TNFSF9P41273 254 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 MARC1Q5VT66 337 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 PLPP4Q5VZY2 271 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 GLT6D1Q7Z4J2 308 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 LENG1Q96BZ8 264 aaPredicted RBP12.49□□□□□ -0.41
SPG11-201ENST00000261866 XPO6Q96QU8 1125 aaKnown RBP12.49□□□□□ -0.41
SPG11-201ENST00000261866 MTSS1O43312 755 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 ZNF682O95780 498 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 GRK3P35626 688 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 HSD17B3P37058 310 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CNTN1Q12860 1018 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CACHD1Q5VU97 1274 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 PRPF18Q99633 342 aaKnown RBP12.49□□□□□ -0.41
SPG11-201ENST00000261866 SAE1Q9UBE0 346 aaPredicted RBP12.49□□□□□ -0.41
SPG11-201ENST00000261866 RPS6KB2Q9UBS0 482 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 MGAT4DA6NG13 374 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 E9PBE3 544 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 KLHL41O60662 606 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 ARHGAP17Q68EM7 881 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 MTSS1LQ765P7 747 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 FAR2Q96K12 515 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CNDP1Q96KN2 507 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 POLR2EP19388 210 aaKnown RBP12.49□□□□□ -0.41
SPG11-201ENST00000261866 RAP1GAP2Q684P5 730 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 TRIM69Q86WT6 500 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 PCYOX1LQ8NBM8 494 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
SPG11-201ENST00000261866 OMDQ99983 421 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 EPN3Q9H201 632 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CRYL1Q9Y2S2 319 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 SPACA6W5XKT8 324 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 FBXO21O94952 628 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 MGAT1P26572 445 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CATSPERGQ6ZRH7 1159 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 VPS37AQ8NEZ2 397 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 XYLBO75191 536 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 SLC26A2P50443 739 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 PDK2Q15119 407 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 NPNTQ6UXI9 565 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 COMMD2Q86X83 199 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CERS5Q8N5B7 392 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 PPP1R2P1Q96PQ5 205 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 CCT8L2Q96SF2 557 aa12.49□□□□□ -0.41
SPG11-201ENST00000261866 USP15Q9Y4E8 981 aaPredicted RBP12.49□□□□□ -0.41
SPG11-201ENST00000261866 E5RJQ4 531 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 TLL1O43897 1013 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 GSSP48637 474 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 CELF3Q5SZQ8 465 aaKnown RBP12.48□□□□□ -0.41
SPG11-201ENST00000261866 KRT77Q7Z794 578 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 GLIS3Q8NEA6 775 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 SPATA20Q8TB22 786 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 SEC16BQ96JE7 1060 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 CLDN5O00501 218 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 NDUFS2O75306 463 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 F9P00740 461 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 CCNG1P51959 295 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 SEMA3FQ13275 785 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 FBXW10Q5XX13 1052 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 AADACL2Q6P093 401 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 ZNF438Q7Z4V0 828 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 FLCNQ8NFG4 579 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 ULBP1Q9BZM6 244 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 PSMD12O00232 456 aaPredicted RBP12.48□□□□□ -0.41
SPG11-201ENST00000261866 NUDT14O95848 222 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 NFICP08651 508 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 UBTFL6P0CB48 400 aaPredicted RBP12.48□□□□□ -0.41
SPG11-201ENST00000261866 CNPY3Q9BT09 278 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 MST1RQ04912 1400 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 CHUKO15111 745 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 FKTNO75072 461 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■□□□□ 10.6
SPG11-201ENST00000261866 NDUFV1P49821 464 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 SERPINB8P50452 374 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 RAB27AP51159 221 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 NLGN2Q8NFZ4 835 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 SENP8Q96LD8 212 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 ERGIC2Q96RQ1 377 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 SH3BP4Q9P0V3 963 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 SLC2A4P14672 509 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 C15orf59Q2T9L4 293 aaPredicted RBP12.48□□□□□ -0.41
SPG11-201ENST00000261866 DAB2IPQ5VWQ8 1189 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.48□□□□□ -0.41
SPG11-201ENST00000261866 TMEM199Q8N511 208 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 BAIAP3O94812 1187 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 PPIL2Q13356 520 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 RGMBQ6NW40 437 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 TTI2Q6NXR4 508 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 KCNK18Q7Z418 384 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 ZNF606Q8WXB4 792 aa12.48□□□□□ -0.41
SPG11-201ENST00000261866 EIF2S1P05198 315 aaKnown RBP12.47□□□□□ -0.41
SPG11-201ENST00000261866 CENPLQ8N0S6 344 aaPredicted RBP12.47□□□□□ -0.41
SPG11-201ENST00000261866 USP13Q92995 863 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms