RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 C10orf111Q8N326 155 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 GIMAP7Q8NHV1 300 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 NUCKS1Q9H1E3 243 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 TRPS1Q9UHF7 1281 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 GGT7Q9UJ14 662 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 SLC27A5Q9Y2P5 690 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 TGM5O43548 720 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 MFSD11O43934 449 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 ENPP2Q13822 863 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 FYB2Q5VWT5 728 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 ADIPOR2Q86V24 386 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 CCDC170Q8IYT3 715 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 TEX26Q8N6G2 289 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 FRMD1Q8N878 549 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 IGSF21Q96ID5 467 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 PKD1L2Q7Z442 2459 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 LIASO43766 372 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 WDR4P57081 412 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 MYL7Q01449 175 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 SASS6Q6UVJ0 657 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 DPP9Q86TI2 863 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 UTP4Q969X6 686 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 TLCD1Q96CP7 247 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 RNPC3Q96LT9 517 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 LGMNQ99538 433 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 SNRNP25Q9BV90 132 aaKnown RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 MTG2Q9H4K7 406 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 POLMQ9NP87 494 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 MTRRQ9UBK8 725 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 BARX2Q9UMQ3 279 aaPredicted RBP5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 AGAP1Q9UPQ3 857 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 HS3ST4Q9Y661 456 aa5.91□□□□□ -1.46
TOPBP1-201ENST00000260810 C17orf102A2RUQ5 167 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 J3KR12 359 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 PSMA7O14818 248 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 KIF20AO95235 890 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 RGS7P49802 495 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 FGL2Q14314 439 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 FBXO27Q8NI29 283 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 ITFG1Q8TB96 612 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 MYCBPAPQ8TBZ2 947 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 FNIP1Q8TF40 1166 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 SEPT8Q92599 483 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 SERGEFQ9UGK8 458 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 LCMT1Q9UIC8 334 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 SARDHQ9UL12 918 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 TRPV2Q9Y5S1 764 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 DNAH1Q9P2D7 4330 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 CCDC169A6NNP5 214 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 ADAM10O14672 748 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 TYROBPO43914 113 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 SSBP05455 408 aaKnown RBP eCLIP5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 TAS2R38P59533 333 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 DMP1Q13316 513 aaPredicted RBP5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 NNTQ13423 1086 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 FAM35AQ86V20 835 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 HOOK3Q86VS8 718 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 CCDC65Q8IXS2 484 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 ART4Q93070 314 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 NT5C1BQ96P26 610 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 MRPL4Q9BYD3 311 aaKnown RBP5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 NIF3L1Q9GZT8 377 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 MMRN2Q9H8L6 949 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 POPDC2Q9HBU9 364 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 ZDHHC4Q9NPG8 344 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 HPS4Q9NQG7 708 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 MED12Q93074 2177 aa5.9□□□□□ -1.46
TOPBP1-201ENST00000260810 ZC3H11AO75152 810 aaKnown RBP eCLIP5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 EPCAMP16422 314 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 MAGEA10P43363 369 aaPredicted RBP5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 MCTP2Q6DN12 878 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 TMC3Q7Z5M5 1100 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 FAM110BQ8TC76 370 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 DERAQ9Y315 318 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 AGAP14A8MT82 685 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 PROSCO94903 275 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 SNRPFP62306 86 aaKnown RBP5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 IFI35P80217 286 aaPredicted RBP5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 SKOR1P84550 965 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 RELL1Q8IUW5 271 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 SUSD6Q92537 303 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 CALML4Q96GE6 196 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 CSPG4P5Q96PW8 444 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 CEP41Q9BYV8 373 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 TLE6Q9H808 572 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 PRMT7Q9NVM4 692 aaPredicted RBP5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 DLGAP2Q9P1A6 1054 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 DNAI1Q9UI46 699 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 TLN1Q9Y490 2541 aaKnown RBP5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 FREM3P0C091 2139 aa5.9□□□□□ -1.47
TOPBP1-201ENST00000260810 ANKRD62A6NC57 917 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 PRRT4C9JH25 899 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 LILRB5O75023 590 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 FKTNO75072 461 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 SMC2O95347 1197 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 FOXN2P32314 431 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 ARSDP51689 593 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 DUSP16Q9BY84 665 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 TRIM4Q9C037 500 aa5.89□□□□□ -1.47
TOPBP1-201ENST00000260810 LINC00597Q9H2U6 94 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms