RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 NTAN1Q96AB6 310 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 C8orf48Q96LL4 319 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 CRISPLD1Q9H336 500 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 PABPC3Q9H361 631 aaKnown RBP23.19■■□□□ 1.3
SIX3-201ENST00000260653 ARHGEF4Q9NR80 690 aa23.19■■□□□ 1.3
SIX3-201ENST00000260653 MTMR11A4FU01 709 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 TRIM66O15016 1216 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 OPA1O60313 960 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 SLC10A2Q12908 348 aaPredicted RBP23.18■■□□□ 1.3
SIX3-201ENST00000260653 SLMAPQ14BN4 828 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 NCBP2-AS2Q69YL0 99 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 RNF19BQ6ZMZ0 732 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 ANKS3Q6ZW76 656 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 VN1R3Q9BXE9 311 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 RCOR3Q9P2K3 495 aaPredicted RBP23.18■■□□□ 1.3
SIX3-201ENST00000260653 SLC27A5Q9Y2P5 690 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 FAM72CH0Y354 149 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 VNN2O95498 520 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 RARGP13631 454 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 RPL22P35268 128 aaKnown RBP23.18■■□□□ 1.3
SIX3-201ENST00000260653 MAGEA11P43364 429 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 USP46P62068 366 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 SPDYCQ5MJ68 293 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 CEP85LQ5SZL2 805 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 FAM72AQ5TYM5 149 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 FAM72DQ6L9T8 149 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 LRIG3Q6UXM1 1119 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 FAM72BQ86X60 149 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 TAB3Q8N5C8 712 aaPredicted RBP23.18■■□□□ 1.3
SIX3-201ENST00000260653 CCDC33Q8N5R6 958 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 ARL8AQ96BM9 186 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 NMUR1Q9HB89 426 aa23.18■■□□□ 1.3
SIX3-201ENST00000260653 TPX2Q9ULW0 747 aaKnown RBP23.18■■□□□ 1.3
SIX3-201ENST00000260653 ABHD14A-ACY1A0A1B0GW23 586 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 F9P00740 461 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 CXCR3P49682 368 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 SCAPQ12770 1279 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 GPR17Q13304 367 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 BTBD8Q5XKL5 378 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 NECAB2Q7Z6G3 386 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 NUP93Q8N1F7 819 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 TRIM62Q9BVG3 475 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 ABCC13Q9NSE7 274 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 H7C4K7 107 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 ZFXP17010 805 aaPredicted RBP23.17■■□□□ 1.3
SIX3-201ENST00000260653 AIF1P55008 147 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 ZNF844Q08AG5 666 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 BEND5Q7L4P6 421 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 WDCPQ9H6R7 721 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 NUDT5Q9UKK9 219 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 CDY1Q9Y6F8 540 aa23.17■■□□□ 1.3
SIX3-201ENST00000260653 A0A1W2PQH9 124 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 H3BRJ5 948 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 EFEMP2O95967 443 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 RAG1P15918 1043 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 TTMPQ5BVD1 217 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 RNASEH2BQ5TBB1 312 aaKnown RBP23.16■■□□□ 1.3
SIX3-201ENST00000260653 IGSF21Q96ID5 467 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 TKTL2Q9H0I9 626 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 USP29Q9HBJ7 922 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 OSER1Q9NX31 292 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 IGLV3-25P01717 112 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 ACRP10323 421 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 STIP1P31948 543 aaKnown RBP23.16■■□□□ 1.3
SIX3-201ENST00000260653 CTCFP49711 727 aaPredicted RBP23.16■■□□□ 1.3
SIX3-201ENST00000260653 SEPT5Q99719 369 aaPredicted RBP23.16■■□□□ 1.3
SIX3-201ENST00000260653 CDC42EP4Q9H3Q1 356 aaKnown RBP23.16■■□□□ 1.3
SIX3-201ENST00000260653 LRRC4CQ9HCJ2 640 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 DTLQ9NZJ0 730 aa23.16■■□□□ 1.3
SIX3-201ENST00000260653 PLXNA3P51805 1871 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 EEF2KO00418 725 aaKnown RBP23.15■■□□□ 1.3
SIX3-201ENST00000260653 ADAM12O43184 909 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 RPL17P18621 184 aaKnown RBP23.15■■□□□ 1.3
SIX3-201ENST00000260653 RBL1P28749 1068 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 SEMA3BQ13214 749 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 SLC29A2Q14542 456 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 ARL13BQ3SXY8 428 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 MGAT5BQ3V5L5 792 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 ZNF689Q96CS4 500 aaPredicted RBP23.15■■□□□ 1.3
SIX3-201ENST00000260653 SCML2Q9UQR0 700 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 KIAA0355O15063 1070 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 KCNN4O15554 427 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 RIPK2O43353 540 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 SHBGP04278 402 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 WDR5P61964 334 aaKnown RBP23.15■■□□□ 1.3
SIX3-201ENST00000260653 DPYSQ14117 519 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 USP41Q3LFD5 358 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 SPOUT1Q5T280 376 aaKnown RBP23.15■■□□□ 1.3
SIX3-201ENST00000260653 DENND2CQ68D51 928 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 RFX8Q6ZV50 586 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 ZCCHC9Q8N567 271 aaKnown RBP23.15■■□□□ 1.3
SIX3-201ENST00000260653 NETO2Q8NC67 525 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 SPPL2BQ8TCT7 592 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 CASP10Q92851 521 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 RC3H2Q9HBD1 1191 aaKnown RBP23.15■■□□□ 1.3
SIX3-201ENST00000260653 SFMBT1Q9UHJ3 866 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 SNX10Q9Y5X0 201 aa23.15■■□□□ 1.3
SIX3-201ENST00000260653 IRAK2O43187 625 aa23.14■■□□□ 1.3
SIX3-201ENST00000260653 MSI1O43347 362 aaKnown RBP23.14■■□□□ 1.3
SIX3-201ENST00000260653 MFSD11O43934 449 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms