RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 SNHG28P0DPA3 235 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 STIP1P31948 543 aaKnown RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 IFRD2Q12894 506 aaPredicted RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 TLR1Q15399 786 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 SH3D19Q5HYK7 790 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 TDRPQ86YL5 185 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 CYP4F12Q9HCS2 524 aa12.7□□□□□ -0.38
USP30-201ENST00000257548 TRNAU1APQ9NX07 287 aaKnown RBP12.7□□□□□ -0.38
USP30-201ENST00000257548 TRIM43BA6NCK2 446 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 TTC36A6NLP5 189 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 CRTAMO95727 393 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 ZFXP17010 805 aaPredicted RBP12.69□□□□□ -0.38
USP30-201ENST00000257548 KDELR1P24390 212 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 SDC4P31431 198 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 ENTPD1P49961 510 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 NR1H2P55055 460 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 C21orf59P57076 290 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 TTLL12Q14166 644 aaPredicted RBP12.69□□□□□ -0.38
USP30-201ENST00000257548 ZBTB41Q5SVQ8 909 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
USP30-201ENST00000257548 C16orf89Q6UX73 402 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 SLC9A9Q8IVB4 645 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 TDRD5Q8NAT2 981 aaKnown RBP12.69□□□□□ -0.38
USP30-201ENST00000257548 CATSPER1Q8NEC5 780 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 CNDP1Q96KN2 507 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
USP30-201ENST00000257548 RSAD1Q9HA92 442 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 TBC1D22BQ9NU19 505 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 CCDC167Q9P0B6 97 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 CDY2AQ9Y6F7 541 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 CDY1Q9Y6F8 540 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 KPNA7A9QM74 516 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 ITGAVP06756 1048 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 TBCCQ15814 346 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 PARP8Q8N3A8 854 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 SPATA6LQ8N4H0 392 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 FAM47BQ8NA70 645 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 MCPH1Q8NEM0 835 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 SLCO2A1Q92959 643 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 RIT2Q99578 217 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 ZNF229Q9UJW7 825 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 A0A0J9YVX5 310 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 HMGCRP04035 888 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 BPGMP07738 259 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 PABPC4LP0CB38 370 aaKnown RBP12.69□□□□□ -0.38
USP30-201ENST00000257548 THRAP10827 490 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 UNGP13051 313 aaPredicted RBP12.69□□□□□ -0.38
USP30-201ENST00000257548 CDKN2BP42772 138 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
USP30-201ENST00000257548 DLGAP5Q15398 846 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 CTC1Q2NKJ3 1217 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 TKFCQ3LXA3 575 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 SLC10A5Q5PT55 438 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 PPM1LQ5SGD2 360 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 TMC7Q7Z402 723 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 C17orf75Q9HAS0 396 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 HESX1Q9UBX0 185 aa12.69□□□□□ -0.38
USP30-201ENST00000257548 MYPNQ86TC9 1320 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 MTA2O94776 668 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 SERPINE1P05121 402 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 CRABP2P29373 138 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 GRIA1P42261 906 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 MTTPP55157 894 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 PLIN5Q00G26 463 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 MYLK3Q32MK0 819 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 XKR5Q6UX68 686 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 MON1BQ7L1V2 547 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 ZC3H3Q8IXZ2 948 aaKnown RBP12.68□□□□□ -0.38
USP30-201ENST00000257548 FBXW8Q8N3Y1 598 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 PDCD6IPQ8WUM4 868 aaKnown RBP12.68□□□□□ -0.38
USP30-201ENST00000257548 RNF34Q969K3 372 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 ABHD8Q96I13 439 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 ANKRD36BP1Q96IX9 119 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 MBOAT7Q96N66 472 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 ZMAT2Q96NC0 199 aaKnown RBP12.68□□□□□ -0.38
USP30-201ENST00000257548 NPAS2Q99743 824 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 SYT11Q9BT88 431 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 ILKAPQ9H0C8 392 aaPredicted RBP12.68□□□□□ -0.38
USP30-201ENST00000257548 SNX25Q9H3E2 840 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 UBP1Q9NZI7 540 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 SNCAIPQ9Y6H5 919 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 TP73O15350 636 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 SPAG6O75602 509 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 CSH1P0DML2 217 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 CSH2P0DML3 217 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 ARL4AP40617 200 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 NAGLUP54802 743 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 MTX3Q5HYI7 312 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 TMEM198Q66K66 360 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 MCF2L2Q86YR7 1114 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 PHF24Q9UPV7 400 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 DMTF1Q9Y222 760 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 MYRFQ9Y2G1 1151 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
USP30-201ENST00000257548 TMEM191CA6NGB0 347 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms