RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 FBXO10Q9UK96 956 aa23.95■■□□□ 1.42
LSM4-201ENST00000252816 CCDC163A0A0D9SF12 145 aa23.94■■□□□ 1.42
LSM4-201ENST00000252816 SGK1O00141 431 aa23.94■■□□□ 1.42
LSM4-201ENST00000252816 IGLV3-27P01718 113 aa23.94■■□□□ 1.42
LSM4-201ENST00000252816 COPB1P53618 953 aaKnown RBP23.94■■□□□ 1.42
LSM4-201ENST00000252816 LPAL2Q16609 132 aa23.94■■□□□ 1.42
LSM4-201ENST00000252816 PREPLQ4J6C6 727 aaPredicted RBP23.94■■□□□ 1.42
LSM4-201ENST00000252816 C10orf76Q5T2E6 689 aa23.94■■□□□ 1.42
LSM4-201ENST00000252816 DCLK2Q8N568 766 aa23.94■■□□□ 1.42
LSM4-201ENST00000252816 C1orf131Q8NDD1 294 aaKnown RBP23.94■■□□□ 1.42
LSM4-201ENST00000252816 DQX1Q8TE96 717 aaKnown RBP23.94■■□□□ 1.42
LSM4-201ENST00000252816 PRRT4C9JH25 899 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 ADAM23O75077 832 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 APBB3O95704 486 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 CNR2P34972 360 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 KRT9P35527 623 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 DGKGP49619 791 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 SIM2Q14190 667 aaPredicted RBP23.93■■□□□ 1.42
LSM4-201ENST00000252816 TAF5Q15542 800 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 ANO6Q4KMQ2 910 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 SYPL2Q5VXT5 272 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 TMEM92Q6UXU6 159 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 AOPEPQ8N6M6 819 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 RUBCNQ92622 972 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 PPP1R13BQ96KQ4 1090 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 STK33Q9BYT3 514 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 STOML2Q9UJZ1 356 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 CLEC4EQ9ULY5 219 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 SIK3Q9Y2K2 1263 aa23.93■■□□□ 1.42
LSM4-201ENST00000252816 MYO18AQ92614 2054 aaKnown RBP23.92■■□□□ 1.42
LSM4-201ENST00000252816 F8VZ95 297 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 GFRA2O00451 464 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 EPHB6O15197 1021 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 TPM2P07951 284 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 CYP11B1P15538 503 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 BPIFB4P59827 614 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 CRY1Q16526 586 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 HSF5Q4G112 596 aaPredicted RBP23.92■■□□□ 1.42
LSM4-201ENST00000252816 FKBP15Q5T1M5 1219 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 PRR23BQ6ZRT6 265 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 BEND5Q7L4P6 421 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 APTXQ7Z2E3 356 aaKnown RBP23.92■■□□□ 1.42
LSM4-201ENST00000252816 ADAM32Q8TC27 787 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 EBF1Q9UH73 591 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 STARD13Q9Y3M8 1113 aa23.92■■□□□ 1.42
LSM4-201ENST00000252816 LGALS16A8MUM7 142 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 AXIN1O15169 862 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 LATS1O95835 1130 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 TBX4P57082 545 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 RING1Q06587 406 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 ADGRF1Q5T601 910 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 NUDT18Q6ZVK8 323 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 TAC4Q86UU9 113 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 ZNF513Q8N8E2 541 aaPredicted RBP23.91■■□□□ 1.42
LSM4-201ENST00000252816 TSTD1Q8NFU3 115 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 KCNV2Q8TDN2 545 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 DDX1Q92499 740 aaKnown RBP23.91■■□□□ 1.42
LSM4-201ENST00000252816 FCRL2Q96LA5 508 aaPredicted RBP23.91■■□□□ 1.42
LSM4-201ENST00000252816 HINFPQ9BQA5 517 aa23.91■■□□□ 1.42
LSM4-201ENST00000252816 FAM207AQ9NSI2 230 aaPredicted RBP23.91■■□□□ 1.42
LSM4-201ENST00000252816 LRRC10BA6NIK2 292 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 TSPAN3O60637 253 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 ERBB2P04626 1255 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 CYBBP04839 570 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 ATP1A3P13637 1013 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 CDK11BP21127 795 aaKnown RBP23.9■■□□□ 1.42
LSM4-201ENST00000252816 POLR2FP61218 127 aaKnown RBP23.9■■□□□ 1.42
LSM4-201ENST00000252816 YWHAZP63104 245 aaKnown RBP23.9■■□□□ 1.42
LSM4-201ENST00000252816 PITX1P78337 314 aaPredicted RBP23.9■■□□□ 1.42
LSM4-201ENST00000252816 PTPN20Q4JDL3 420 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 EGFLAMQ63HQ2 1017 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 NUGGCQ68CJ6 796 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 NOP9Q86U38 636 aaKnown RBP23.9■■□□□ 1.42
LSM4-201ENST00000252816 ANKRD20A12PQ8NF67 263 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 DDI1Q8WTU0 396 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 GAB3Q8WWW8 586 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 SLC39A13Q96H72 371 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 NOX5Q96PH1 765 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 ACOX2Q99424 681 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 POPDC2Q9HBU9 364 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 NCDNQ9UBB6 729 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 SLC27A6Q9Y2P4 619 aa23.9■■□□□ 1.42
LSM4-201ENST00000252816 CAPN9O14815 690 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 RPP40O75818 363 aaKnown RBP23.89■■□□□ 1.41
LSM4-201ENST00000252816 SGSHP51688 502 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 DGKEP52429 567 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 NNTQ13423 1086 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 SYCP1Q15431 976 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 EOGTQ5NDL2 527 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 TAF3Q5VWG9 929 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 ANO7Q6IWH7 933 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 FAM183BPQ6ZVS7 135 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 CEP68Q76N32 757 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 UNC45BQ8IWX7 931 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 SERPINB11Q96P15 392 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 TRIM62Q9BVG3 475 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 RAB23Q9ULC3 237 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 TLR6Q9Y2C9 796 aa23.89■■□□□ 1.41
LSM4-201ENST00000252816 GOLGA6L7A0A1B0GV03 622 aa23.88■■□□□ 1.41
LSM4-201ENST00000252816 IGLV3-25P01717 112 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms