RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PKN3Q6P5Z2 889 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 TSSK4Q6SA08 328 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 OLFML1Q6UWY5 402 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 DENND1CQ8IV53 801 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 UNC45BQ8IWX7 931 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 WDTC1Q8N5D0 677 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 TMEM35BQ8NCS4 154 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 KCNV2Q8TDN2 545 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 DQX1Q8TE96 717 aaKnown RBP13.32□□□□□ -0.28
VPREB3-201ENST00000248948 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 DDX1Q92499 740 aaKnown RBP13.32□□□□□ -0.28
VPREB3-201ENST00000248948 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 DNAJC17Q9NVM6 304 aaKnown RBP13.32□□□□□ -0.28
VPREB3-201ENST00000248948 SFMBT1Q9UHJ3 866 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 TLR6Q9Y2C9 796 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 CKAP5Q14008 2032 aa13.32□□□□□ -0.28
VPREB3-201ENST00000248948 OTOGLQ3ZCN5 2332 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 CAPN9O14815 690 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 EPHB6O15197 1021 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 IRAK2O43187 625 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 IGLV3-25P01717 112 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 CYBBP04839 570 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 SCNN1AP37088 669 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 STAT1P42224 750 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 TNFRSF4P43489 277 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 SLC6A11P48066 632 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 TBX4P57082 545 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 YWHAZP63104 245 aaKnown RBP13.31□□□□□ -0.28
VPREB3-201ENST00000248948 TPM4P67936 248 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 IQCB1Q15051 598 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 EFHC1Q5JVL4 640 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 FYB2Q5VWT5 728 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 TPGS1Q6ZTW0 290 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 FAM183BPQ6ZVS7 135 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 SLC26A9Q7LBE3 791 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 TRMT11Q7Z4G4 463 aaKnown RBP13.31□□□□□ -0.28
VPREB3-201ENST00000248948 NOP9Q86U38 636 aaKnown RBP13.31□□□□□ -0.28
VPREB3-201ENST00000248948 TAC4Q86UU9 113 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 LONP2Q86WA8 852 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 CAMKK1Q8N5S9 505 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 MSANTD4Q8NCY6 345 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 ZNF397Q8NF99 534 aaPredicted RBP13.31□□□□□ -0.28
VPREB3-201ENST00000248948 ATRIPQ8WXE1 791 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 AZIN2Q96A70 460 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 PIWIL1Q96J94 861 aaKnown RBP13.31□□□□□ -0.28
VPREB3-201ENST00000248948 PCMTD1Q96MG8 357 aaPredicted RBP13.31□□□□□ -0.28
VPREB3-201ENST00000248948 SLC2A13Q96QE2 648 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 PDCL3Q9H2J4 239 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 SYNCQ9H7C4 482 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 TJP2Q9UDY2 1190 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 NOCTQ9UK39 431 aaKnown RBP13.31□□□□□ -0.28
VPREB3-201ENST00000248948 MMP17Q9ULZ9 603 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 SLC8A2Q9UPR5 921 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 R4GN57 208 aa13.31□□□□□ -0.28
VPREB3-201ENST00000248948 ZFHX2Q9C0A1 2572 aaPredicted RBP13.3□□□□□ -0.28
VPREB3-201ENST00000248948 FAM186AA6NE01 2351 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 GFRA2O00451 464 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 GFRA3O60609 400 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 DAB1O75553 588 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 GFPT2O94808 682 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 ERBB2P04626 1255 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 CNR2P34972 360 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 KIR2DL1P43626 348 aaPredicted RBP13.3□□□□□ -0.28
VPREB3-201ENST00000248948 SLC11A2P49281 568 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 DGKGP49619 791 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 NOMO3P69849 1222 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 CDR2Q01850 454 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 MESP2Q0VG99 397 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 ZSCAN23Q3MJ62 389 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 C10orf76Q5T2E6 689 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 ADGRF1Q5T601 910 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 TRIM72Q6ZMU5 477 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 FCRL2Q96LA5 508 aaPredicted RBP13.3□□□□□ -0.28
VPREB3-201ENST00000248948 SLC2A11Q9BYW1 496 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 NLRC4Q9NPP4 1024 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
VPREB3-201ENST00000248948 C2orf42Q9NWW7 574 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 FBXO10Q9UK96 956 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 NAALADL1Q9UQQ1 740 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 SLC27A6Q9Y2P4 619 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 STARD13Q9Y3M8 1113 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 GVINP1Q7Z2Y8 2422 aa13.3□□□□□ -0.28
VPREB3-201ENST00000248948 ZNF292O60281 2723 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 A0A1B0GTH6 734 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 A0A1W2PQC6 194 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 APBB3O95704 486 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 LMNAP02545 664 aaKnown RBP13.29□□□□□ -0.28
VPREB3-201ENST00000248948 APOEP02649 317 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 GABRB2P47870 512 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 SEC13P55735 322 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 MTA1Q13330 715 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 DMC1Q14565 340 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 EIF4HQ15056 248 aaKnown RBP13.29□□□□□ -0.28
VPREB3-201ENST00000248948 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 RNF43Q68DV7 783 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 WDR5BQ86VZ2 330 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 NAT16Q8N8M0 369 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms