RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 IRF1P10914 325 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 MIPP30301 263 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 RDXP35241 583 aaKnown RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 MARCKSL1P49006 195 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 SLC25A11Q02978 314 aaKnown RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 PIGHQ14442 188 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 ARHGAP15Q53QZ3 475 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 CC2D1AQ6P1N0 951 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 STRADAQ7RTN6 431 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 MAFAQ8NHW3 353 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 USP13Q92995 863 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 HLA-CQ95604 372 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 ACSF2Q96CM8 615 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 NACA2Q9H009 215 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 PCSK1NQ9UHG2 260 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 XPO7Q9UIA9 1087 aaKnown RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 PACSIN2Q9UNF0 486 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 SP100P23497 879 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 MAN1A1P33908 653 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 MTHFRP42898 656 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 CXCR3P49682 368 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 SLC7A9P82251 487 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 TFF2Q03403 129 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 TRIP4Q15650 581 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 ZSCAN18Q8TBC5 510 aaPredicted RBP20.96■□□□□ 0.95
SNRPA-201ENST00000243563 SERPINB11Q96P15 392 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 LRRC3BQ96PB8 259 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 RRN3Q9NYV6 651 aa20.96■□□□□ 0.95
SNRPA-201ENST00000243563 GREM1O60565 184 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 STC2O76061 302 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 DDX6P26196 483 aaKnown RBP eCLIP20.95■□□□□ 0.94
SNRPA-201ENST00000243563 TBX4P57082 545 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 ATP13A4Q4VNC1 1196 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 FAM78AQ5JUQ0 283 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 NT5DC3Q86UY8 548 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 ZSCAN30Q86W11 494 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 SLC35F6Q8N357 371 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 CD101Q93033 1021 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 CDK5RAP1Q96SZ6 601 aaKnown RBP20.95■□□□□ 0.94
SNRPA-201ENST00000243563 GPATCH2LQ9NWQ4 482 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 TLR6Q9Y2C9 796 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 SNX10Q9Y5X0 201 aa20.95■□□□□ 0.94
SNRPA-201ENST00000243563 KLKB1P03952 638 aa20.94■□□□□ 0.94
SNRPA-201ENST00000243563 TNNT1P13805 278 aa20.94■□□□□ 0.94
SNRPA-201ENST00000243563 FCARP24071 287 aa20.94■□□□□ 0.94
SNRPA-201ENST00000243563 SMAD4Q13485 552 aaKnown RBP20.94■□□□□ 0.94
SNRPA-201ENST00000243563 SCYL2Q6P3W7 929 aa20.94■□□□□ 0.94
SNRPA-201ENST00000243563 ARID3BQ8IVW6 561 aaPredicted RBP20.94■□□□□ 0.94
SNRPA-201ENST00000243563 TTC16Q8NEE8 873 aa20.94■□□□□ 0.94
SNRPA-201ENST00000243563 KRT35Q92764 455 aa20.94■□□□□ 0.94
SNRPA-201ENST00000243563 CDH7Q9ULB5 785 aa20.94■□□□□ 0.94
SNRPA-201ENST00000243563 GJC1P36383 396 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 GGCXP38435 758 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 VIPR2P41587 438 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 CA9Q16790 459 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 SMTNL2Q2TAL5 461 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 KCNT1Q5JUK3 1230 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 ZNF569Q5MCW4 686 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 TADA2BQ86TJ2 420 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 ASB16Q96NS5 453 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 WDR24Q96S15 920 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 ZWILCHQ9H900 591 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 KLHL11Q9NVR0 708 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 USP18Q9UMW8 372 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 ARHGAP26Q9UNA1 814 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 HBS1LQ9Y450 684 aaKnown RBP20.93■□□□□ 0.94
SNRPA-201ENST00000243563 KCNU1A8MYU2 1149 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 LEFTY2O00292 366 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 RNF8O76064 485 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 MOCS2O96007 188 aaPredicted RBP20.93■□□□□ 0.94
SNRPA-201ENST00000243563 GBP1P32455 592 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 AVPR1AP37288 418 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 NNTQ13423 1086 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 ACAP1Q15027 740 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 IFI16Q16666 785 aaKnown RBP20.93■□□□□ 0.94
SNRPA-201ENST00000243563 ARTNQ5T4W7 220 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 SH3RF2Q8TEC5 729 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 SNRNP25Q9BV90 132 aaKnown RBP20.93■□□□□ 0.94
SNRPA-201ENST00000243563 TKTL2Q9H0I9 626 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 ARHGEF38Q9NXL2 777 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 CFAP97Q9P2B7 532 aa20.93■□□□□ 0.94
SNRPA-201ENST00000243563 GOLGA6L9A6NEM1 432 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 SPOPO43791 374 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 PFKLP17858 780 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 GBP2P32456 591 aaPredicted RBP20.92■□□□□ 0.94
SNRPA-201ENST00000243563 PCK1P35558 622 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 SSR1P43307 286 aaKnown RBP20.92■□□□□ 0.94
SNRPA-201ENST00000243563 LEXMQ3ZCV2 418 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 NADSYN1Q6IA69 706 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 NYAP1Q6ZVC0 841 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 PYROXD2Q8N2H3 581 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 TDP1Q9NUW8 608 aa20.92■□□□□ 0.94
SNRPA-201ENST00000243563 SOBPA7XYQ1 873 aa20.91■□□□□ 0.94
SNRPA-201ENST00000243563 RING1Q06587 406 aa20.91■□□□□ 0.94
SNRPA-201ENST00000243563 USP4Q13107 963 aa20.91■□□□□ 0.94
SNRPA-201ENST00000243563 PPP2R5DQ14738 602 aa20.91■□□□□ 0.94
SNRPA-201ENST00000243563 ZNF77Q15935 545 aa20.91■□□□□ 0.94
SNRPA-201ENST00000243563 RNF34Q969K3 372 aa20.91■□□□□ 0.94
SNRPA-201ENST00000243563 MYEOVQ96EZ4 313 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms