RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 C3orf62Q6ZUJ4 267 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 SLC24A5Q71RS6 500 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 ZNF280BQ86YH2 543 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 IGDCC3Q8IVU1 814 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 ZNF317Q96PQ6 595 aaPredicted RBP19.15■□□□□ 0.66
HOXC11-201ENST00000243082 CCDC134Q9H6E4 229 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 PRDM16Q9HAZ2 1276 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 ANLNQ9NQW6 1124 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 ACTL7BQ9Y614 415 aa19.15■□□□□ 0.66
HOXC11-201ENST00000243082 DDHD2O94830 711 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 BRAFP15056 766 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 ADRA1BP35368 520 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 FAM189BP81408 668 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 QPCTQ16769 361 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 CLLU1OSQ5K130 101 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 FAXCQ5TGI0 409 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 PM20D1Q6GTS8 502 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 SRRM1Q8IYB3 904 aaKnown RBP19.14■□□□□ 0.65
HOXC11-201ENST00000243082 PGAP3Q96FM1 320 aaPredicted RBP19.14■□□□□ 0.65
HOXC11-201ENST00000243082 PRMT1Q99873 361 aaKnown RBP19.14■□□□□ 0.65
HOXC11-201ENST00000243082 ETNK1Q9HBU6 452 aa19.14■□□□□ 0.65
HOXC11-201ENST00000243082 FRMPD3Q5JV73 1810 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 C5orf60A6NFR6 353 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 H3BRJ5 948 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 I6L893 689 aaPredicted RBP19.13■□□□□ 0.65
HOXC11-201ENST00000243082 AMHP03971 560 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 DRD4P21917 467 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 PHBP35232 272 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 ELK3P41970 407 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 RASA2Q15283 850 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 GLB1LQ6UWU2 654 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 C4orf22Q6V702 233 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 PPP1R21Q6ZMI0 780 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 AGGF1Q8N302 714 aaeCLIP19.13■□□□□ 0.65
HOXC11-201ENST00000243082 NTAN1Q96AB6 310 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 CHMP6Q96FZ7 201 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 KLC2Q9H0B6 622 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 PPCSQ9HAB8 311 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 STARD7Q9NQZ5 370 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 SLC24A2Q9UI40 661 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 TEX264Q9Y6I9 313 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 MFSD11O43934 449 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 AVILO75366 819 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 METTL18O95568 372 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 GNRH1P01148 92 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 TSHRP16473 764 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 TYMPP19971 482 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 AIF1P55008 147 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 DSC1Q08554 894 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 SCAPQ12770 1279 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 DPYSQ14117 519 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 TRABD2AQ86V40 505 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 PALM2Q8IXS6 379 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 THEM5Q8N1Q8 247 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 FBF1Q8TES7 1133 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 IRGQQ8WZA9 623 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 ACSS3Q9H6R3 686 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 HMX1Q9NP08 348 aaPredicted RBP19.13■□□□□ 0.65
HOXC11-201ENST00000243082 KCNK9Q9NPC2 374 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 DMAP1Q9NPF5 467 aaPredicted RBP19.13■□□□□ 0.65
HOXC11-201ENST00000243082 FETUBQ9UGM5 382 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 FBXW11Q9UKB1 542 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 CHMP2BQ9UQN3 213 aa19.13■□□□□ 0.65
HOXC11-201ENST00000243082 HACD1B0YJ81 288 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 RASA4BC9J798 803 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 FAM72CH0Y354 149 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 RASA4O43374 803 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 CREB3O43889 395 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 VAV1P15498 845 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 FAM72AQ5TYM5 149 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 FAM72DQ6L9T8 149 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 BZW1Q7L1Q6 419 aaKnown RBP19.12■□□□□ 0.65
HOXC11-201ENST00000243082 FAM72BQ86X60 149 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 SCML4Q8N228 414 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 TFB1MQ8WVM0 346 aaKnown RBP19.12■□□□□ 0.65
HOXC11-201ENST00000243082 EDEM1Q92611 657 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 RRN3Q9NYV6 651 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 PCDHB8Q9UN66 801 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 NR2E3Q9Y5X4 410 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 GEMIN4P57678 1058 aaKnown RBP19.12■□□□□ 0.65
HOXC11-201ENST00000243082 NR1H3Q13133 447 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 SEMA3BQ13214 749 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 EFTUD2Q15029 972 aaKnown RBP eCLIP19.12■□□□□ 0.65
HOXC11-201ENST00000243082 LRRC14Q15048 493 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 PKN2Q16513 984 aaKnown RBP19.12■□□□□ 0.65
HOXC11-201ENST00000243082 HEATR6Q6AI08 1181 aaKnown RBP19.12■□□□□ 0.65
HOXC11-201ENST00000243082 RFX8Q6ZV50 586 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 SRLQ86TD4 932 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 CAND1Q86VP6 1230 aaKnown RBP19.12■□□□□ 0.65
HOXC11-201ENST00000243082 HTR3CQ8WXA8 447 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 LGMNQ99538 433 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 DHRS4Q9BTZ2 278 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 FRMD8Q9BZ67 464 aaPredicted RBP19.12■□□□□ 0.65
HOXC11-201ENST00000243082 DDIT4Q9NX09 232 aa19.12■□□□□ 0.65
HOXC11-201ENST00000243082 ARVCFO00192 962 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 EEF2KO00418 725 aaKnown RBP19.11■□□□□ 0.65
HOXC11-201ENST00000243082 DCLK1O15075 740 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 APRTP07741 180 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 IFNAR2P48551 515 aa19.11■□□□□ 0.65
HOXC11-201ENST00000243082 PAFAH1B3Q15102 231 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms