RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 C12orf29Q8N999 325 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PIWIL2Q8TC59 973 aaKnown RBP12.81□□□□□ -0.36
NUP88-201ENST00000225696 RTP4Q96DX8 246 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 SORT1Q99523 831 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 EBNA1BP2Q99848 306 aaKnown RBP12.81□□□□□ -0.36
NUP88-201ENST00000225696 BCO2Q9BYV7 579 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 ZNF358Q9NW07 568 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 ASNSD1Q9NWL6 643 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 MKS1Q9NXB0 559 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 BTBD7Q9P203 1132 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 MFHAS1Q9Y4C4 1052 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PARP14Q460N5 1801 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 IGKV6D-21A0A0A0MT36 114 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 MED7O43513 233 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PRPSAP2O60256 369 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 IQCF3P0C7M6 154 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 GPD1P21695 349 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 UBA1P22314 1058 aaKnown RBP12.81□□□□□ -0.36
NUP88-201ENST00000225696 SLC1A6P48664 564 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 IDH3AP50213 366 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 GRM1Q13255 1194 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PRKG1Q13976 671 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PDE1CQ14123 709 aaPredicted RBP12.81□□□□□ -0.36
NUP88-201ENST00000225696 SLC5A9Q2M3M2 681 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 LGSNQ5TDP6 509 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 OR6B2Q6IFH4 312 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PGM2L1Q6PCE3 622 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 ACAD11Q709F0 780 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 EEPD1Q7L9B9 569 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 SATL1Q86VE3 508 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 C10orf107Q8IVU9 208 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PPP1R14CQ8TAE6 165 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 GSDMBQ8TAX9 411 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 GDPD5Q8WTR4 605 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 DEPDC1BQ8WUY9 529 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 TFB1MQ8WVM0 346 aaKnown RBP12.81□□□□□ -0.36
NUP88-201ENST00000225696 TRAPPC12Q8WVT3 735 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 NCSTNQ92542 709 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 MOCOSQ96EN8 888 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 CDHR1Q96JP9 859 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 HEXIM2Q96MH2 286 aaKnown RBP12.81□□□□□ -0.36
NUP88-201ENST00000225696 CNPY3Q9BT09 278 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 KLC2Q9H0B6 622 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 MINDY3Q9H8M7 445 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PCDH18Q9HCL0 1135 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 NGRNQ9NPE2 291 aaKnown RBP12.81□□□□□ -0.36
NUP88-201ENST00000225696 MAN1C1Q9NR34 630 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 DNAJB4Q9UDY4 337 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 CDH22Q9UJ99 828 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PSME4Q14997 1843 aa12.81□□□□□ -0.36
NUP88-201ENST00000225696 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 WDR27A2RRH5 827 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 ZNF195O14628 629 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 TPP1O14773 563 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 BIRC5O15392 142 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 OPHN1O60890 802 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 CILPO75339 1184 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 MAFO75444 373 aaPredicted RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 ITGB3P05106 788 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 VCLP18206 1134 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 BACE1P56817 501 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 EN1Q05925 392 aaPredicted RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 CXCL9Q07325 125 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 CUL3Q13618 768 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 TFDP2Q14188 446 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 PCLAFQ15004 111 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 ZNF667Q5HYK9 610 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 FRMD7Q6ZUT3 714 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 MARK2Q7KZI7 788 aaKnown RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 TMEM176AQ96HP8 235 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 NDNQ99608 321 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 PTPRHQ9HD43 1115 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 MYOZ2Q9NPC6 264 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 DMAP1Q9NPF5 467 aaPredicted RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 ACSS2Q9NR19 701 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 POMPQ9Y244 141 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 LCTP09848 1927 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 H3BNX3 289 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 APOL1O14791 398 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 CCNT2O60583 730 aaKnown RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 FKBP6O75344 327 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 FARP2O94887 1054 aaPredicted RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 TNNC2P02585 160 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 PFKMP08237 780 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 MAGEA6P43360 314 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 STAT5BP51692 787 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 COPAP53621 1224 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 FAM47CQ5HY64 1035 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 DEFB107AQ8IZN7 70 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 CXorf38Q8TB03 319 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 SNRNP25Q9BV90 132 aaKnown RBP12.8□□□□□ -0.36
NUP88-201ENST00000225696 MOCS1Q9NZB8 636 aa12.8□□□□□ -0.36
NUP88-201ENST00000225696 ANK1P16157 1881 aa12.79□□□□□ -0.36
NUP88-201ENST00000225696 BCLAF3A2AJT9 711 aaKnown RBP12.79□□□□□ -0.36
NUP88-201ENST00000225696 ZBTB42B2RXF5 422 aa12.79□□□□□ -0.36
NUP88-201ENST00000225696 ZBTB14O43829 449 aa12.79□□□□□ -0.36
NUP88-201ENST00000225696 B4GALT4O60513 344 aa12.79□□□□□ -0.36
NUP88-201ENST00000225696 PLIN3O60664 434 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms