RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 FAM170BA6NMN3 283 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 MDM4O15151 490 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 DAB1O75553 588 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 TBX18O95935 607 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 RFC1P35251 1148 aaPredicted RBP17.12■□□□□ 0.33
LIM2-201ENST00000221973 FLT3P36888 993 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 VAV2P52735 878 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 RPL7AP62424 266 aaKnown RBP17.12■□□□□ 0.33
LIM2-201ENST00000221973 C10orf120Q5SQS8 335 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 PPP1R15BQ5SWA1 713 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 SYPL2Q5VXT5 272 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 CLDN23Q96B33 292 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 ASB16Q96NS5 453 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 SLC22A12Q96S37 553 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 NUP85Q9BW27 656 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 SLC46A2Q9BY10 475 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 NACA2Q9H009 215 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 SEMA4AQ9H3S1 761 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 TASP1Q9H6P5 420 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.12■□□□□ 0.33
LIM2-201ENST00000221973 CTTNBP2NLQ9P2B4 639 aa17.12■□□□□ 0.33
LIM2-201ENST00000221973 A0A0U1RQJ8 604 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 COCHO43405 550 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 OAS1P00973 400 aaKnown RBP17.11■□□□□ 0.33
LIM2-201ENST00000221973 LMNAP02545 664 aaKnown RBP17.11■□□□□ 0.33
LIM2-201ENST00000221973 HDCP19113 662 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 TARSP26639 723 aaKnown RBP17.11■□□□□ 0.33
LIM2-201ENST00000221973 TUBP50607 506 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 EFEMP1Q12805 493 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 UBXN2BQ14CS0 331 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 TRNP1Q6NT89 227 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 BEND5Q7L4P6 421 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 TADA2BQ86TJ2 420 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
LIM2-201ENST00000221973 RXFP2Q8WXD0 754 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 ATRIPQ8WXE1 791 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 RNF38Q9H0F5 515 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 HEBP1Q9NRV9 189 aa17.11■□□□□ 0.33
LIM2-201ENST00000221973 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 TMEM191CA6NGB0 347 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 C2CD4BA6NLJ0 364 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 CCDC175P0C221 793 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 MBL2P11226 248 aaPredicted RBP17.1■□□□□ 0.33
LIM2-201ENST00000221973 PDGFRAP16234 1089 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
LIM2-201ENST00000221973 NOS2P35228 1153 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 ATP5C1P36542 298 aaKnown RBP17.1■□□□□ 0.33
LIM2-201ENST00000221973 MATKP42679 507 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 PITX1P78337 314 aaPredicted RBP17.1■□□□□ 0.33
LIM2-201ENST00000221973 GRM2Q14416 872 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 ARCQ7LC44 396 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 ZNF276Q8N554 614 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 SUMF1Q8NBK3 374 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 SLC35G2Q8TBE7 412 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 ZNF564Q8TBZ8 553 aaPredicted RBP17.1■□□□□ 0.33
LIM2-201ENST00000221973 ADAM32Q8TC27 787 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 RFFLQ8WZ73 363 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 CFAP57Q96MR6 1250 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 CDK5RAP1Q96SZ6 601 aaKnown RBP17.1■□□□□ 0.33
LIM2-201ENST00000221973 LACRTQ9GZZ8 138 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 OSGEPQ9NPF4 335 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 OLA1Q9NTK5 396 aaKnown RBP17.1■□□□□ 0.33
LIM2-201ENST00000221973 SFMBT1Q9UHJ3 866 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 RASAL2Q9UJF2 1139 aa17.1■□□□□ 0.33
LIM2-201ENST00000221973 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
LIM2-201ENST00000221973 CKMP06732 381 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 TFE3P19532 575 aaPredicted RBP17.09■□□□□ 0.33
LIM2-201ENST00000221973 GPD1P21695 349 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 SULT1E1P49888 294 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 OGDHQ02218 1023 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 KIF5AQ12840 1032 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 MSANTD2Q6P1R3 559 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 VITQ6UXI7 678 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 TAC4Q86UU9 113 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 MIB1Q86YT6 1006 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 RHOT2Q8IXI1 618 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 CMTM8Q8IZV2 173 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 TXLNBQ8N3L3 684 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 DQX1Q8TE96 717 aaKnown RBP17.09■□□□□ 0.33
LIM2-201ENST00000221973 DNASE1L2Q92874 299 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 BTBD6Q96KE9 485 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 SMG9Q9H0W8 520 aaKnown RBP17.09■□□□□ 0.33
LIM2-201ENST00000221973 TRPV4Q9HBA0 871 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 ZFP14Q9HCL3 533 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 SMPD4Q9NXE4 827 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 MARCH2Q9P0N8 246 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 UVRAGQ9P2Y5 699 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 TRIM10Q9UDY6 481 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 DNMT3LQ9UJW3 386 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 ANAPC7Q9UJX3 599 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 STAP1Q9ULZ2 295 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 PYCARDQ9ULZ3 195 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 DUSP10Q9Y6W6 482 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 GREB1Q4ZG55 1949 aa17.09■□□□□ 0.33
LIM2-201ENST00000221973 SYNJ2BP-COX16A0A087WUM0 186 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 PJA2O43164 708 aa17.08■□□□□ 0.32
LIM2-201ENST00000221973 MSI1O43347 362 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms