RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 SLC23A3Q6PIS1 610 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 BHLHA9Q7RTU4 235 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 DENND1CQ8IV53 801 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 SMARCE1Q969G3 411 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 STRIP2Q9ULQ0 834 aa15.71■□□□□ 0.11
UPK3A-201ENST00000216211 GFRA2O00451 464 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 XPO1O14980 1071 aaKnown RBP15.7■□□□□ 0.1
UPK3A-201ENST00000216211 ZNF217O75362 1048 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 CFIP05156 583 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 DPP6P42658 865 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 BCAT1P54687 386 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 MFAP3P55082 362 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 SHC2P98077 582 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 ZNF33AQ06730 810 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 ZNF252P-AS1Q0IIN9 211 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 BST2Q10589 180 aaKnown RBP15.7■□□□□ 0.1
UPK3A-201ENST00000216211 PM20D1Q6GTS8 502 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 ISM2Q6H9L7 571 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 KIAA1324Q6UXG2 1013 aaKnown RBP15.7■□□□□ 0.1
UPK3A-201ENST00000216211 SLC41A1Q8IVJ1 513 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 SPATA20Q8TB22 786 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 UBA3Q8TBC4 463 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 SLC35C1Q96A29 364 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 HESX1Q9UBX0 185 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 ARMCX3Q9UH62 379 aaPredicted RBP15.7■□□□□ 0.1
UPK3A-201ENST00000216211 CLEC4EQ9ULY5 219 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 SLC27A6Q9Y2P4 619 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 STON1Q9Y6Q2 735 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 FRYQ5TBA9 3013 aa15.7■□□□□ 0.1
UPK3A-201ENST00000216211 CYBBP04839 570 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 DEKP35659 375 aaKnown RBP15.69■□□□□ 0.1
UPK3A-201ENST00000216211 IL12RB1P42701 662 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 YWHAEP62258 255 aaKnown RBP15.69■□□□□ 0.1
UPK3A-201ENST00000216211 LRRC63Q05C16 580 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 ADIGQ0VDE8 80 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 DUOXA1Q1HG43 343 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 CAVIN1Q6NZI2 390 aaKnown RBP15.69■□□□□ 0.1
UPK3A-201ENST00000216211 FMNL3Q8IVF7 1028 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 UBR7Q8N806 425 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 DEFB124Q8NES8 71 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 PLD4Q96BZ4 506 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 PIWIL1Q96J94 861 aaKnown RBP15.69■□□□□ 0.1
UPK3A-201ENST00000216211 MRGPRX1Q96LB2 322 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 LRRC4Q9HBW1 653 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 THAP10Q9P2Z0 257 aaPredicted RBP15.69■□□□□ 0.1
UPK3A-201ENST00000216211 SFMBT1Q9UHJ3 866 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 USP24Q9UPU5 2620 aa15.69■□□□□ 0.1
UPK3A-201ENST00000216211 MUC22E2RYF6 1773 aaPredicted RBP15.69■□□□□ 0.1
UPK3A-201ENST00000216211 VDRP11473 427 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 CSRP1P21291 193 aaKnown RBP15.68■□□□□ 0.1
UPK3A-201ENST00000216211 HOXD12P35452 270 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 FMO5P49326 533 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 ZNF445P59923 1031 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 FOXC1Q12948 553 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 FUT11Q495W5 492 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 ANKS1BQ7Z6G8 1248 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 FAM217AQ8IXS0 508 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 CPXM2Q8N436 756 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 TRIML1Q8N9V2 468 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 CEP76Q8TAP6 659 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 DDI1Q8WTU0 396 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 UCMAQ8WVF2 138 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 EDEM1Q92611 657 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 HSPA12BQ96MM6 686 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 GTPBP2Q9BX10 602 aaKnown RBP15.68■□□□□ 0.1
UPK3A-201ENST00000216211 OLA1Q9NTK5 396 aaKnown RBP15.68■□□□□ 0.1
UPK3A-201ENST00000216211 TMEM63CQ9P1W3 806 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 SLC6A14Q9UN76 642 aa15.68■□□□□ 0.1
UPK3A-201ENST00000216211 ZFHX4Q86UP3 3567 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 YJEFN3A6XGL0 299 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 E7ENQ6 273 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 O00370 1275 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 PSMA7O14818 248 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 TSPAN3O60637 253 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 NDUFS2O75306 463 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 SERPINF2P08697 491 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 CEACAM1P13688 526 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 LCP1P13796 627 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 CD44P16070 742 aaKnown RBP15.67■□□□□ 0.1
UPK3A-201ENST00000216211 TBXAS1P24557 533 aaPredicted RBP15.67■□□□□ 0.1
UPK3A-201ENST00000216211 STIM1Q13586 685 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 ZNF234Q14588 700 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 STARD3Q14849 445 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 TRIP4Q15650 581 aaPredicted RBP15.67■□□□□ 0.1
UPK3A-201ENST00000216211 ZSCAN23Q3MJ62 389 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 BSPRYQ5W0U4 402 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 TMEM270Q6UE05 265 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 SIX6OS1Q8N1H7 587 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 RNF139Q8WU17 664 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 SORCS1Q8WY21 1168 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 TIGD1Q96MW7 591 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 GTPBP4Q9BZE4 634 aaKnown RBP15.67■□□□□ 0.1
UPK3A-201ENST00000216211 PRDM16Q9HAZ2 1276 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 CAPN10Q9HC96 672 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 METTL14Q9HCE5 456 aaKnown RBP15.67■□□□□ 0.1
UPK3A-201ENST00000216211 HOOK1Q9UJC3 728 aaKnown RBP15.67■□□□□ 0.1
UPK3A-201ENST00000216211 CEP295Q9C0D2 2601 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 ASPMQ8IZT6 3477 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 PCNX2A6NKB5 2137 aa15.67■□□□□ 0.1
UPK3A-201ENST00000216211 PIK3R2O00459 728 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms