RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Txnrd2Q9JLT4 524 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Dcun1d1Q9QZ73 259 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Mapk13Q9Z1B7 366 aa11.65□□□□□ -0.54
Topbp1-201ENSMUST00000035164 Myh9Q8VDD5 1960 aaKnown RBP11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ptpn11P35235 597 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 LmnaP48678 665 aaKnown RBP11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Coq10bQ3THF9 240 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mrgprx2Q3UG50 352 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Sarm1Q6PDS3 724 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Fnip2Q80TD3 1108 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cog3Q8CI04 820 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 TfQ921I1 697 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Abcg3Q99P81 650 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 PyglQ9ET01 850 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cntnap4Q99P47 1310 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pdia2D3Z6P0 527 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Olfr220E9Q050 325 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 SfnO70456 248 aaKnown RBP11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 LbpQ61805 481 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Mrgprb8Q7TN51 330 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pggt1bQ8BUY9 377 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dctn2Q99KJ8 402 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 CabyrQ9D424 453 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dtwd1Q9D8U7 304 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ap4s1Q9WVL1 144 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Wdr46Q9Z0H1 622 aaKnown RBP11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Atp6v0a1Q9Z1G4 839 aaKnown RBP11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Cntnap5cQ0V8T7 1305 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Vmn2r103E9PWW0 856 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Q3U4G0 281 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gpd2Q64521 727 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Qsox1Q8BND5 748 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dedd2Q8QZV0 330 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Slc35f5Q8R314 524 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 HnrnprQ8VHM5 632 aaKnown RBP11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Crtc3Q91X84 619 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dnajc18Q9CZJ9 357 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Fam227bQ9D518 532 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Abcb9Q9JJ59 762 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Clca3bE9PUL3 1044 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Serpinb9O08797 374 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dhx15O35286 795 aaKnown RBP11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Serpina6Q06770 397 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gm3414Q3TNU4 584 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Kcna4Q61423 654 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 ProcrQ64695 242 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Best3Q6H1V1 669 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gucy2gQ6TL19 1100 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tmem198Q8BG75 360 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nup93Q8BJ71 819 aaKnown RBP11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tmtc3Q8BRH0 920 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Syt15Q8C6N3 418 aa11.64□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Spata31d1aE9QA35 1336 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tatdn2B7ZNL9 783 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Oog1E9Q5G7 496 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Akap1O08715 857 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ptp4a2O70274 167 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 GsnP13020 780 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Plk2P53351 682 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 ThraP63058 492 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Proser1Q5PRE5 913 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 NcaphQ8C156 731 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 MyocdQ8VIM5 935 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Pcdhb2Q91Y00 799 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 NvlQ9DBY8 855 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zbtb11G5E8B9 1050 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Sema6aO35464 1031 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Arl1P61211 181 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Sephs2P97364 452 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Otol1Q4ZJM7 482 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Scaf4Q6PFF0 1209 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ankrd45Q810N6 248 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zfp418Q8BFS8 652 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dlgap2Q8BJ42 1059 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Trub1Q8C0D0 338 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Nlrp4bQ8C6J9 863 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ccdc92Q8VDN4 314 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Serpina3nQ91WP6 418 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Sec16bQ91XT4 1051 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Wrnip1Q91XU0 660 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 DccP70211 1447 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tnfrsf18O35714 228 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Crabp2P22935 138 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Serpina1eQ00898 413 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Zfp217Q3U0X6 1041 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Arhgap17Q3UIA2 846 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Utp14bQ6EJB6 756 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Gpr139Q80UC8 345 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Krt75Q8BGZ7 551 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Il33Q8BVZ5 266 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 TbcelQ8C5W3 424 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Lamtor4Q8CF66 99 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Plbd1Q8VCI0 550 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Tma16Q9CR02 221 aaKnown RBP11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 KelQ9EQF2 713 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Aqp5Q9WTY4 265 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Arid3bQ9Z1N7 568 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Ern2Q9Z2E3 911 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Dpy19l4A2AJQ3 722 aa11.63□□□□□ -0.55
Topbp1-201ENSMUST00000035164 Herc6F2Z461 1003 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms