RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 NUP205Q92621 2012 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 GFRA2O00451 464 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 ZBTB24O43167 697 aaPredicted RBP19.39■□□□□ 0.69
CLN6-220ENST00000637450 PENKP01210 267 aaPredicted RBP19.39■□□□□ 0.69
CLN6-220ENST00000637450 CSRP1P21291 193 aaKnown RBP19.39■□□□□ 0.69
CLN6-220ENST00000637450 ITPKAP23677 461 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 PRCPP42785 496 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 EFEMP1Q12805 493 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 PNOCQ13519 176 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 SLC23A3Q6PIS1 610 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 PIGZQ86VD9 579 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 ANKRD52Q8NB46 1076 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 BHMTQ93088 406 aa19.39■□□□□ 0.69
CLN6-220ENST00000637450 IGHV1OR15-9A0A0B4J2B8 117 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 ZNF217O75362 1048 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 CEACAM1P13688 526 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 NDUFV2P19404 249 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 HOXD12P35452 270 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 CHKAP35790 457 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 RPL6Q02878 288 aaKnown RBP19.38■□□□□ 0.69
CLN6-220ENST00000637450 COBLL1Q53SF7 1204 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 FMR1NBQ8N0W7 255 aaPredicted RBP19.38■□□□□ 0.69
CLN6-220ENST00000637450 ARHGAP18Q8N392 663 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 DCLK3Q9C098 648 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 RMND1Q9NWS8 449 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 RASAL2Q9UJF2 1139 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 SLC27A6Q9Y2P4 619 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 COQ4Q9Y3A0 265 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 ZFHX4Q86UP3 3567 aa19.38■□□□□ 0.69
CLN6-220ENST00000637450 MYH10P35580 1976 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 WASH3PC4AMC7 463 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 SLC16A3O15427 465 aaKnown RBP19.37■□□□□ 0.69
CLN6-220ENST00000637450 HMBSP08397 361 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 CORO1AP31146 461 aaKnown RBP19.37■□□□□ 0.69
CLN6-220ENST00000637450 UAP1L1Q3KQV9 507 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 CBWD6Q4V339 395 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 CBWD3Q5JTY5 395 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 CBWD5Q5RIA9 395 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 ZNF658Q5TYW1 1059 aaPredicted RBP19.37■□□□□ 0.69
CLN6-220ENST00000637450 FYB2Q5VWT5 728 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 PM20D1Q6GTS8 502 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 ZC3H3Q8IXZ2 948 aaKnown RBP19.37■□□□□ 0.69
CLN6-220ENST00000637450 DEFB119Q8N690 84 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 CEP76Q8TAP6 659 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 ERLEC1Q96DZ1 483 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 GSDMAQ96QA5 445 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 CACNA2D2Q9NY47 1150 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 AGO1Q9UL18 857 aaKnown RBP19.37■□□□□ 0.69
CLN6-220ENST00000637450 RAD54BQ9Y620 910 aa19.37■□□□□ 0.69
CLN6-220ENST00000637450 ATXN2Q99700 1313 aaKnown RBP19.36■□□□□ 0.69
CLN6-220ENST00000637450 ZBED1O96006 694 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 ENGP17813 658 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 TKTL1P51854 596 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 SLC8A3P57103 927 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 YWHAGP61981 247 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLN6-220ENST00000637450 FKBP3Q00688 224 aaKnown RBP19.36■□□□□ 0.69
CLN6-220ENST00000637450 ZNF33AQ06730 810 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 DUOXA1Q1HG43 343 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 TCERG1LQ5VWI1 586 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 ANKRD40Q6AI12 368 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 MRGPRX1Q96LB2 322 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 TSG101Q99816 390 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 MARCH2Q9P0N8 246 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 SLC6A14Q9UN76 642 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 CYP8B1Q9UNU6 501 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 USP24Q9UPU5 2620 aa19.36■□□□□ 0.69
CLN6-220ENST00000637450 TULP2O00295 520 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 MAPK8P45983 427 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 PMS1P54277 932 aaKnown RBP19.35■□□□□ 0.69
CLN6-220ENST00000637450 MFAP3P55082 362 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 ZNF252P-AS1Q0IIN9 211 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 CUL2Q13617 745 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 DCAF17Q5H9S7 520 aaPredicted RBP19.35■□□□□ 0.69
CLN6-220ENST00000637450 RSRC2Q7L4I2 434 aaKnown RBP19.35■□□□□ 0.69
CLN6-220ENST00000637450 DENND1CQ8IV53 801 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 SLC41A1Q8IVJ1 513 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 ENGASEQ8NFI3 743 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 SPATA20Q8TB22 786 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 PIWIL1Q96J94 861 aaKnown RBP19.35■□□□□ 0.69
CLN6-220ENST00000637450 SLC6A17Q9H1V8 727 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 CAPN10Q9HC96 672 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 THAP10Q9P2Z0 257 aaPredicted RBP19.35■□□□□ 0.69
CLN6-220ENST00000637450 STRIP2Q9ULQ0 834 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 STON1Q9Y6Q2 735 aa19.35■□□□□ 0.69
CLN6-220ENST00000637450 FRYQ5TBA9 3013 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 SLC12A8A0AV02 714 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 XPO1O14980 1071 aaKnown RBP19.34■□□□□ 0.69
CLN6-220ENST00000637450 NPC1O15118 1278 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 CFIP05156 583 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 SERPINF2P08697 491 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 PDE4CQ08493 712 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 ENPP2Q13822 863 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 GEN1Q17RS7 908 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 GOLGA7BQ2TAP0 167 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 BHLHA9Q7RTU4 235 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 RABEPKQ7Z6M1 372 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 METTL3Q86U44 580 aaKnown RBP19.34■□□□□ 0.69
CLN6-220ENST00000637450 FAM217AQ8IXS0 508 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 CPXM2Q8N436 756 aa19.34■□□□□ 0.69
CLN6-220ENST00000637450 NDRG1Q92597 394 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms