RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZNF197O14709 1029 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 BUB1O43683 1085 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 TLR5O60602 858 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 GPD1P21695 349 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 MATKP42679 507 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 SLC5A9Q2M3M2 681 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 ARHGAP15Q53QZ3 475 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 C10orf120Q5SQS8 335 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 SNX30Q5VWJ9 437 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 PAPD7Q5XG87 772 aaKnown RBP15.07■□□□□ 0
LINC00339-208ENST00000634934 TXNDC8Q6A555 127 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 TRNP1Q6NT89 227 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.07■□□□□ 0
LINC00339-208ENST00000634934 ING5Q8WYH8 240 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 CFAP57Q96MR6 1250 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 S1PR5Q9H228 398 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 SALL4Q9UJQ4 1053 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 GREB1Q4ZG55 1949 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 TCF20Q9UGU0 1960 aaKnown RBP15.07■□□□□ 0
LINC00339-208ENST00000634934 SYNJ2BP-COX16A0A087WUM0 186 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 C2orf78A6NCI8 922 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 TMEM110-MUSTN1A8MSY1 372 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 BTNL10A8MVZ5 291 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 MYO1FO00160 1098 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 NRG2O14511 850 aaPredicted RBP15.07■□□□□ 0
LINC00339-208ENST00000634934 TBX18O95935 607 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 FSHRP23945 695 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 PSMA2P25787 234 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 SDC4P31431 198 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 NOS2P35228 1153 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 ATP11AP98196 1134 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 OGDHQ02218 1023 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 EFEMP1Q12805 493 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 GPS2Q13227 327 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 TEAD2Q15562 447 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 PRSS36Q5K4E3 855 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 ZNF569Q5MCW4 686 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 ARCQ7LC44 396 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 TADA2BQ86TJ2 420 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 ITFG1Q8TB96 612 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 ADAM32Q8TC27 787 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 RIPOR3Q96MK2 946 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 CDK5RAP1Q96SZ6 601 aaKnown RBP15.07■□□□□ 0
LINC00339-208ENST00000634934 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
LINC00339-208ENST00000634934 SLITRK6Q9H5Y7 841 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 ANKZF1Q9H8Y5 726 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 COX16Q9P0S2 106 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 CD207Q9UJ71 328 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 STAP1Q9ULZ2 295 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 MYO16Q9Y6X6 1858 aa15.07■□□□□ 0
LINC00339-208ENST00000634934 MUC3AQ02505 3323 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 ZNF638Q14966 1978 aaKnown RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 C2orf16Q68DN1 1984 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 TARSL2A2RTX5 802 aaKnown RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 CTAGE15A4D2H0 777 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 MDM4O15151 490 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 MOSPD3O75425 235 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 CTAGE8P0CG41 777 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 DESP17661 470 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 SULT1E1P49888 294 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 ZNF143P52747 638 aaPredicted RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 MESDQ14696 234 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 TCEAL1Q15170 157 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 CDO1Q16878 200 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 LONRF2Q1L5Z9 754 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 C15orf59Q2T9L4 293 aaPredicted RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 LEXMQ3ZCV2 418 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 CCDC14Q49A88 953 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 BEND6Q5SZJ8 279 aaPredicted RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 STXBP5Q5T5C0 1151 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 GPR158Q5T848 1215 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 BEND5Q7L4P6 421 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 HDXQ7Z353 690 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 CTAGE6Q86UF2 777 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 CTAGE4Q8IX94 777 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 MAB21L3Q8N8X9 362 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 DQX1Q8TE96 717 aaKnown RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 FAM204AQ9H8W3 233 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 VIPAS39Q9H9C1 493 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 WDR6Q9NNW5 1121 aaKnown RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 OLA1Q9NTK5 396 aaKnown RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.06■□□□□ 0
LINC00339-208ENST00000634934 IP6K2Q9UHH9 426 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 SFMBT1Q9UHJ3 866 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 RASAL2Q9UJF2 1139 aa15.06■□□□□ 0
LINC00339-208ENST00000634934 CLUHO75153 1309 aa15.05■□□□□ 0
LINC00339-208ENST00000634934 GRXCR2A6NFK2 248 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 COCHO43405 550 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 SASH3O75995 380 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 MTA2O94776 668 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 MOCS3O95396 460 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 CEBPBP17676 345 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 TFE3P19532 575 aaPredicted RBP15.05■□□□□ -0
LINC00339-208ENST00000634934 ATP5C1P36542 298 aaKnown RBP15.05■□□□□ -0
LINC00339-208ENST00000634934 MTHFRP42898 656 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 TUBP50607 506 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 PITX1P78337 314 aaPredicted RBP15.05■□□□□ -0
LINC00339-208ENST00000634934 NME3Q13232 169 aa15.05■□□□□ -0
LINC00339-208ENST00000634934 IFI16Q16666 785 aaKnown RBP15.05■□□□□ -0
LINC00339-208ENST00000634934 SLC25A52Q3SY17 297 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms