RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 CYBBP04839 570 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.21
LINC00339-207ENST00000634712 NCAM1P13591 858 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 TYRP14679 529 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 RPL34P49207 117 aaKnown RBP16.39■□□□□ 0.21
LINC00339-207ENST00000634712 C2orf27AQ580R0 203 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 HEATR6Q6AI08 1181 aaKnown RBP16.39■□□□□ 0.21
LINC00339-207ENST00000634712 SLC47A2Q86VL8 602 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 C12orf40Q86WS4 652 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 PASD1Q8IV76 773 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 FAM71AQ8IYT1 594 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 STK33Q9BYT3 514 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 LHX5Q9H2C1 402 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 PLCB1Q9NQ66 1216 aa16.39■□□□□ 0.21
LINC00339-207ENST00000634712 DNAJC17Q9NVM6 304 aaKnown RBP16.39■□□□□ 0.21
LINC00339-207ENST00000634712 LIMA1Q9UHB6 759 aaKnown RBP16.39■□□□□ 0.21
LINC00339-207ENST00000634712 AGO1Q9UL18 857 aaKnown RBP16.39■□□□□ 0.21
LINC00339-207ENST00000634712 PRR23AA6NEV1 266 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 E5RJQ4 531 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 K7EQS6 105 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 TULP3O75386 442 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 KLKB1P03952 638 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 TNFRSF4P43489 277 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 MRPS21P82921 87 aaKnown RBP16.38■□□□□ 0.21
LINC00339-207ENST00000634712 UBXN1Q04323 297 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 PDCLQ13371 301 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 TRIP4Q15650 581 aaPredicted RBP16.38■□□□□ 0.21
LINC00339-207ENST00000634712 KLHL40Q2TBA0 621 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 GRAMD4Q6IC98 578 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 DPY19L2P1Q6NXN4 242 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 PKN3Q6P5Z2 889 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 TMEM110Q86TL2 294 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 ZBTB44Q8NCP5 570 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 EZH1Q92800 747 aaPredicted RBP16.38■□□□□ 0.21
LINC00339-207ENST00000634712 NELL1Q92832 810 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 BHMTQ93088 406 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 SYNCQ9H7C4 482 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 FAM207AQ9NSI2 230 aaPredicted RBP16.38■□□□□ 0.21
LINC00339-207ENST00000634712 C2orf42Q9NWW7 574 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 MARK1Q9P0L2 795 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 PIEZO1Q92508 2521 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 ZFHX2Q9C0A1 2572 aaPredicted RBP16.38■□□□□ 0.21
LINC00339-207ENST00000634712 A0A0A0MRY4 1105 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 K7ESF4 209 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 TDGF1P13385 188 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 FNTBP49356 437 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 POLR2FP61218 127 aaKnown RBP16.38■□□□□ 0.21
LINC00339-207ENST00000634712 MSANTD2Q6P1R3 559 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 SYT13Q7L8C5 426 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 ASCL5Q7RTU5 278 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 LONP2Q86WA8 852 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 UNC45BQ8IWX7 931 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 ETFBKMTQ8IXQ9 262 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 CAMKK1Q8N5S9 505 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 USP33Q8TEY7 942 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 BPIFA3Q9BQP9 254 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 NAA15Q9BXJ9 866 aaKnown RBP16.38■□□□□ 0.21
LINC00339-207ENST00000634712 PLK2Q9NYY3 685 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 CYTH4Q9UIA0 394 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 DAAM1Q9Y4D1 1078 aa16.38■□□□□ 0.21
LINC00339-207ENST00000634712 LRRC10BA6NIK2 292 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 LGALS16A8MUM7 142 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 PAPSS1O43252 624 aaPredicted RBP16.37■□□□□ 0.21
LINC00339-207ENST00000634712 MSI1O43347 362 aaKnown RBP16.37■□□□□ 0.21
LINC00339-207ENST00000634712 CACNG3O60359 315 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 CYP11B1P15538 503 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 ZNF18P17022 549 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 TIE1P35590 1138 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 DGKGP49619 791 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 KLK7P49862 253 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 ZNF165P49910 485 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 TBX4P57082 545 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 YWHAZP63104 245 aaKnown RBP16.37■□□□□ 0.21
LINC00339-207ENST00000634712 DMC1Q14565 340 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 NCAPHQ15003 741 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 SYCP1Q15431 976 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 OR6B2Q6IFH4 312 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 CPXM2Q8N436 756 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 WDTC1Q8N5D0 677 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 TMEM35BQ8NCS4 154 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 C1orf131Q8NDD1 294 aaKnown RBP16.37■□□□□ 0.21
LINC00339-207ENST00000634712 NEK11Q8NG66 645 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
LINC00339-207ENST00000634712 DDI1Q8WTU0 396 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 SERPINB11Q96P15 392 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 SPAG5Q96R06 1193 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 POPDC2Q9HBU9 364 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 RAB23Q9ULC3 237 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 NAALADL1Q9UQQ1 740 aa16.37■□□□□ 0.21
LINC00339-207ENST00000634712 F8VZ95 297 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 LILRB5O75023 590 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 HOXA6P31267 233 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 CNR2P34972 360 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 SLC11A2P49281 568 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 HSF5Q4G112 596 aaPredicted RBP16.36■□□□□ 0.21
LINC00339-207ENST00000634712 EFHC1Q5JVL4 640 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 C10orf76Q5T2E6 689 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 TAF3Q5VWG9 929 aa16.36■□□□□ 0.21
LINC00339-207ENST00000634712 NUGGCQ68CJ6 796 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms