RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ZNF521Q96K83 1311 aa3.88□□□□□ -1.79
SRP54-214ENST00000630962 ZNF335Q9H4Z2 1342 aaPredicted RBP3.88□□□□□ -1.79
SRP54-214ENST00000630962 OR2W5A6NFC9 320 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 MYMKA6NI61 221 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 AGPSO00116 658 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 FYB1O15117 783 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 ZSCAN9O15535 394 aaPredicted RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 VIPP01282 170 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 TSHRP16473 764 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 ATF7P17544 494 aaPredicted RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 NTSR1P30989 418 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 HTR7P34969 479 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 CCT4P50991 539 aaKnown RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 KRTAP10-11P60412 298 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 WDR5P61964 334 aaKnown RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 BTKQ06187 659 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 NSUN2Q08J23 767 aaKnown RBP eCLIP3.87□□□□□ -1.79
SRP54-214ENST00000630962 MTAPQ13126 283 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 SEMA3BQ13214 749 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 KLF9Q13886 244 aaPredicted RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 CBFBQ13951 182 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 AASDHQ4L235 1098 aaPredicted RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 C10orf25Q5T742 122 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 ABLIM2Q6H8Q1 611 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 CCSAPQ6IQ19 270 aaPredicted RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 SLC2A7Q6PXP3 512 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 CLASRPQ8N2M8 674 aaKnown RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 RNF152Q8N8N0 203 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 GRAMD1AQ96CP6 724 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 LRRC46Q96FV0 321 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 EIF3CQ99613 913 aaKnown RBP3.87□□□□□ -1.79
SRP54-214ENST00000630962 TRMOQ9BU70 441 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 ERVK-5Q9HDB9 667 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 NECTIN3Q9NQS3 549 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 HELLSQ9NRZ9 838 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 KLHL13Q9P2N7 655 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 LPAR3Q9UBY5 353 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 CEP83Q9Y592 693 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 SPATA31A5Q5VU36 1347 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 SPATA31A7Q8IWB4 1347 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 ZMYM2Q9UBW7 1377 aa3.87□□□□□ -1.79
SRP54-214ENST00000630962 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.86□□□□□ -1.79
SRP54-214ENST00000630962 PROB1E7EW31 1015 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 KPNA5O15131 536 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 TP73O15350 636 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 INPPL1O15357 1258 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 CNOT3O75175 753 aaKnown RBP3.86□□□□□ -1.79
SRP54-214ENST00000630962 FGF18O76093 207 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 SGPL1O95470 568 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 GLP2RO95838 553 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 MYL1P05976 194 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 IGKV2-30P06310 120 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 EGR1P18146 543 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 MST1P26927 711 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 GSTM5P46439 218 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 KCNJ4P48050 445 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 PRIM2P49643 509 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 DEUP1Q05D60 604 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 SRSF1Q07955 248 aaKnown RBP eCLIP3.86□□□□□ -1.79
SRP54-214ENST00000630962 PICALMQ13492 652 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 STIM1Q13586 685 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 MAPKAPK3Q16644 382 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 CRTC1Q6UUV9 634 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 KIAA0408Q6ZU52 694 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 ANKRD13BQ86YJ7 626 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 CCDC28AQ8IWP9 274 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 TXLNBQ8N3L3 684 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 OR52L2PQ8NGH6 319 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 KAT2BQ92831 832 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 KAZALD1Q96I82 304 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 VPS45Q9NRW7 570 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 ELOVL5Q9NYP7 299 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 NFU1Q9UMS0 254 aa3.86□□□□□ -1.79
SRP54-214ENST00000630962 PMM2O15305 246 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 TLR2O60603 784 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 CTSAP10619 480 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 SLC5A1P13866 664 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 SFPQP23246 707 aaKnown RBP eCLIP3.85□□□□□ -1.79
SRP54-214ENST00000630962 GALNSP34059 522 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 IGHMBP2P38935 993 aaKnown RBP3.85□□□□□ -1.79
SRP54-214ENST00000630962 NR4A2P43354 598 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 AK2P54819 239 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 CFHR1Q03591 330 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 MAPK7Q13164 816 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 SLC14A1Q13336 389 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 CSHL1Q14406 222 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 RRAGBQ5VZM2 374 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 FBXO38Q6PIJ6 1188 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 SHC4Q6S5L8 630 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 RINLQ6ZS11 566 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 GLMPQ8WWB7 406 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 TNIP3Q96KP6 325 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 TBCBQ99426 244 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 TRIM2Q9C040 744 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 PCDHAC1Q9H158 963 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 RGL1Q9NZL6 768 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 ASAP1Q9ULH1 1129 aa3.85□□□□□ -1.79
SRP54-214ENST00000630962 ZMYND8Q9ULU4 1186 aaPredicted RBP3.85□□□□□ -1.79
SRP54-214ENST00000630962 FAM50BQ9Y247 325 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms