RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GET4Q7L5D6 327 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 CHSY1Q86X52 802 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 FAM131BQ86XD5 332 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 DEFB106AQ8N104 65 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 RNF25Q96BH1 459 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 ATP6V1G3Q96LB4 118 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 NCAPGQ9BPX3 1015 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 DPH5Q9H2P9 285 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 CRTAC1Q9NQ79 661 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 YIPF1Q9Y548 306 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 XPO1O14980 1071 aaKnown RBP12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 PPFIA2O75334 1257 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 TTC19Q6DKK2 380 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 C12orf76Q8N812 135 aaPredicted RBP12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZSWIM1Q9BR11 485 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 KLHL11Q9NVR0 708 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 MTMR11A4FU01 709 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 STAU1O95793 577 aaKnown RBP12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 CEP85LQ5SZL2 805 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 FUKQ8N0W3 1084 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 CRYBG2Q8N1P7 616 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 MAB21L3Q8N8X9 362 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 FUBP3Q96I24 572 aaKnown RBP eCLIP12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 FAXDC2Q96IV6 333 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 VRTNQ9H8Y1 702 aa12.95□□□□□ -0.34
SYNGAP1-207ENST00000628646 CYBBP04839 570 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 EIF3BP55884 814 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 C1QBPQ07021 282 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 CYP1B1Q16678 543 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 HECTD3Q5T447 861 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 PMF1Q6P1K2 205 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 TAX1BP1Q86VP1 789 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 CCNYQ8ND76 341 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 ECEL1O95672 775 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 IGFBP6P24592 240 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 GPR15P49685 360 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 CDH6P55285 790 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 NOMO3P69849 1222 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 SLC6A3Q01959 620 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 GPNMBQ14956 572 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 SMTNL2Q2TAL5 461 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 KRT71Q3SY84 523 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 SCARA3Q6AZY7 606 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 CCDC25Q86WR0 208 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 SCAMP5Q8TAC9 235 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 SPON2Q9BUD6 331 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 WDCPQ9H6R7 721 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 EBAG9O00559 213 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZBTB24O43167 697 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 FOSL2P15408 326 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 COMTP21964 271 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 ERVFC1P60507 584 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 GNGT1P63211 74 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 UBE3AQ05086 875 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 BSPRYQ5W0U4 402 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 FAM183BPQ6ZVS7 135 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 CCHCR1Q8TD31 782 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 CPXM1Q96SM3 734 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 MARCH2Q9P0N8 246 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 SEPT10Q9P0V9 454 aa12.94□□□□□ -0.34
SYNGAP1-207ENST00000628646 TLDC2A0PJX2 215 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 TLR5O60602 858 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 IFNB1P01574 187 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 UNGP13051 313 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 RARGP13631 454 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 ATP5C1P36542 298 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 YWHAGP61981 247 aaKnown RBP eCLIP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZNF268Q14587 947 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 SLMAPQ14BN4 828 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 FAM172AQ8WUF8 416 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 SLC22A17Q8WUG5 538 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 FMO2Q99518 471 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 HERC2P3Q9BVR0 1158 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 MARCH5Q9NX47 278 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 GMIPQ9P107 970 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 MTRRQ9UBK8 725 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 PCYOX1Q9UHG3 505 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 ZNF197O14709 1029 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 PYGMP11217 842 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 DRG2P55039 364 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 PTPN20Q4JDL3 420 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 XKR4Q5GH76 650 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 DNAJB7Q7Z6W7 309 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 CWH43Q9H720 699 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 POPDC2Q9HBU9 364 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 M0QZQ0 153 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 KRT7P08729 469 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 GJA1P17302 382 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 PTPN2P17706 415 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 NUMBP49757 651 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 INCA1Q0VD86 236 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 PIGHQ14442 188 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 GPR158Q5T848 1215 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 PDZD8Q8NEN9 1154 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 KBTBD7Q8WVZ9 684 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 MCRS1Q96EZ8 462 aa12.93□□□□□ -0.34
SYNGAP1-207ENST00000628646 ERP44Q9BS26 406 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms