RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 PTPN9P43378 593 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 GET4Q7L5D6 327 aaPredicted RBP17.32■□□□□ 0.36
CCNA1-203ENST00000625767 BNIPLQ7Z465 357 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 TXLNBQ8N3L3 684 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 LRRC57Q8N9N7 239 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 GCNAQ96QF7 691 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 CNPY3Q9BT09 278 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 SMOC2Q9H3U7 446 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 POMKQ9H5K3 350 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 UBE2ZQ9H832 354 aaPredicted RBP17.32■□□□□ 0.36
CCNA1-203ENST00000625767 WDR6Q9NNW5 1121 aaKnown RBP17.32■□□□□ 0.36
CCNA1-203ENST00000625767 ANLNQ9NQW6 1124 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 GKN1Q9NS71 199 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 KCND1Q9NSA2 647 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 DDIT4Q9NX09 232 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 SMPD4Q9NXE4 827 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 CLUHO75153 1309 aa17.32■□□□□ 0.36
CCNA1-203ENST00000625767 I6L893 689 aaPredicted RBP17.31■□□□□ 0.36
CCNA1-203ENST00000625767 SCAMP3O14828 347 aaKnown RBP17.31■□□□□ 0.36
CCNA1-203ENST00000625767 NCK2O43639 380 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 LRCH4O75427 683 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 FTCDO95954 541 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 TXNRD3NBQ6F5E7 133 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 MSANTD2Q6P1R3 559 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 BEND5Q7L4P6 421 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 DAAM2Q86T65 1068 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 FNIP1Q8TF40 1166 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 CENPIQ92674 756 aaPredicted RBP17.31■□□□□ 0.36
CCNA1-203ENST00000625767 ZFRQ96KR1 1074 aaKnown RBP17.31■□□□□ 0.36
CCNA1-203ENST00000625767 PEBP4Q96S96 227 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 MAGEB5Q9BZ81 275 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 FAM204AQ9H8W3 233 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 PRDM6Q9NQX0 595 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 IP6K2Q9UHH9 426 aa17.31■□□□□ 0.36
CCNA1-203ENST00000625767 PACSIN2Q9UNF0 486 aaPredicted RBP17.31■□□□□ 0.36
CCNA1-203ENST00000625767 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.3■□□□□ 0.36
CCNA1-203ENST00000625767 GRXCR2A6NFK2 248 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 IRAK2O43187 625 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 HDCP19113 662 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 COMTP21964 271 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 FSHRP23945 695 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 PPP3CCP48454 512 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 TAS2R40P59535 323 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 ITIH3Q06033 890 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 EIF4EBP2Q13542 120 aaPredicted RBP17.3■□□□□ 0.36
CCNA1-203ENST00000625767 CES5AQ6NT32 575 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 FAM131BQ86XD5 332 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 NPAS3Q8IXF0 933 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 TTC16Q8NEE8 873 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 RIN3Q8TB24 985 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 SLITRK6Q9H5Y7 841 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 MARCH2Q9P0N8 246 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 CD207Q9UJ71 328 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 STAP1Q9ULZ2 295 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 CCL26Q9Y258 94 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 USP15Q9Y4E8 981 aaPredicted RBP17.3■□□□□ 0.36
CCNA1-203ENST00000625767 ALG6Q9Y672 507 aa17.3■□□□□ 0.36
CCNA1-203ENST00000625767 SLC12A8A0AV02 714 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 FANCGO15287 622 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 OLFM2O95897 454 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 CKMP06732 381 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 IRF1P10914 325 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 TNNT1P13805 278 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 SP100P23497 879 aaPredicted RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 IL1R2P27930 398 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 ATP5C1P36542 298 aaKnown RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 TUBP50607 506 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 KCNQ1P51787 676 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 DEUP1Q05D60 604 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 CYP4V2Q6ZWL3 525 aaPredicted RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 ZSCAN30Q86W11 494 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 RNF10Q8N5U6 811 aaKnown RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 NIPA2Q8N8Q9 360 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 LEMD2Q8NC56 503 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 FGF13Q92913 245 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 ACSF2Q96CM8 615 aaPredicted RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 NACA2Q9H009 215 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 PCSK1NQ9UHG2 260 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 CPQQ9Y646 472 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 ENDOD1O94919 500 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 PRAMEF12O95522 483 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 MBL2P11226 248 aaPredicted RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 MIPP30301 263 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 MARCKSL1P49006 195 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 PIGHQ14442 188 aaPredicted RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 ATP13A4Q4VNC1 1196 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 ZC3H12AQ5D1E8 599 aaKnown RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 ATAT1Q5SQI0 421 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 C11orf63Q6NUN7 778 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 CC2D1AQ6P1N0 951 aaPredicted RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 SCYL2Q6P3W7 929 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 SLC35F6Q8N357 371 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 CCDC185Q8N715 623 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 ADAMTS19Q8TE59 1207 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 MYADMQ96S97 322 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 TRIM62Q9BVG3 475 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 TASP1Q9H6P5 420 aa17.29■□□□□ 0.36
CCNA1-203ENST00000625767 XPO7Q9UIA9 1087 aaKnown RBP17.29■□□□□ 0.36
CCNA1-203ENST00000625767 DNMT3LQ9UJW3 386 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms