RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 RESP18Q5W5W9 173 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 TMEM215Q68D42 235 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 SLCO6A1Q86UG4 719 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 UNC93AQ86WB7 457 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 HDDC3Q8N4P3 179 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 XPO6Q96QU8 1125 aaKnown RBP11.64□□□□□ -0.55
DDX41-218ENST00000625286 FBXO44Q9H4M3 255 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 ITM2CQ9NQX7 267 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 WSB2Q9NYS7 404 aaPredicted RBP11.64□□□□□ -0.55
DDX41-218ENST00000625286 STON1Q9Y6Q2 735 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 CKAP5Q14008 2032 aa11.64□□□□□ -0.55
DDX41-218ENST00000625286 GFRA2O00451 464 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 HLA-DRAP01903 254 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 NR3C1P04150 777 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 RPN1P04843 607 aaKnown RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 FAM200BP0CF97 657 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 IL12RB1P42701 662 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 PLA2G4AP47712 749 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 ATXN3P54252 364 aaPredicted RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 MFAP3P55082 362 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 PPP3CAQ08209 521 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 INCA1Q0VD86 236 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 GRIK2Q13002 908 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 PKP1Q13835 747 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 PLEKHG6Q3KR16 790 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 KMT5BQ4FZB7 885 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 PREPLQ4J6C6 727 aaPredicted RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 C10orf120Q5SQS8 335 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 KLHDC10Q6PID8 442 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 KIAA1324Q6UXG2 1013 aaKnown RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 C1orf216Q8TAB5 229 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 TMC2Q8TDI7 906 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 SORCS1Q8WY21 1168 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 DNASE2BQ8WZ79 361 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 CYFIP2Q96F07 1278 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 TOE1Q96GM8 510 aaKnown RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 PAGE5Q96GU1 130 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 PIWIL1Q96J94 861 aaKnown RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 ZNF396Q96N95 335 aaPredicted RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 BACH2Q9BYV9 841 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 USP36Q9P275 1121 aaKnown RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 THAP10Q9P2Z0 257 aaPredicted RBP11.63□□□□□ -0.55
DDX41-218ENST00000625286 LHX6Q9UPM6 363 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 SLC27A6Q9Y2P4 619 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 USP3Q9Y6I4 520 aa11.63□□□□□ -0.55
DDX41-218ENST00000625286 K7ELQ4 463 aaPredicted RBP11.62□□□□□ -0.55
DDX41-218ENST00000625286 IKBKBO14920 756 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 SLFN14P0C7P3 912 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 FTH1P19P0C7X4 201 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 CD6P30203 668 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 COPAP53621 1224 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 SCAPQ12770 1279 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 SLC14A1Q13336 389 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 PPP1R26Q5T8A7 1209 aaPredicted RBP11.62□□□□□ -0.55
DDX41-218ENST00000625286 SDE2Q6IQ49 451 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 NUDT18Q6ZVK8 323 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 METTL3Q86U44 580 aaKnown RBP11.62□□□□□ -0.55
DDX41-218ENST00000625286 PROSER1Q86XN7 944 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 MARCH9Q86YJ5 346 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 NAXDQ8IW45 347 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 RGL4Q8IZJ4 473 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 ZNF276Q8N554 614 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 TAS1R2Q8TE23 839 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 ADAMTS14Q8WXS8 1223 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 TAF4BQ92750 862 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 GPR174Q9BXC1 333 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 DNMT3LQ9UJW3 386 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 NAGPAQ9UK23 515 aa11.62□□□□□ -0.55
DDX41-218ENST00000625286 AGO1Q9UL18 857 aaKnown RBP11.62□□□□□ -0.55
DDX41-218ENST00000625286 URB1O60287 2271 aaKnown RBP11.62□□□□□ -0.55
DDX41-218ENST00000625286 H0Y626 953 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 PDXKO00764 312 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 NDUFS2O75306 463 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 CILPO75339 1184 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 TRIM16O95361 564 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 SYPP08247 313 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 HMBSP08397 361 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 TRIM49P0CI25 452 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 TRIM49CP0CI26 452 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 PDIA4P13667 645 aaKnown RBP11.61□□□□□ -0.55
DDX41-218ENST00000625286 CD58P19256 250 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 PRKCHP24723 683 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 GCLMP48507 274 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 TPMTP51580 245 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 ZNF423Q2M1K9 1284 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 C19orf48Q6RUI8 117 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 CCNI2Q6ZMN8 369 aaPredicted RBP11.61□□□□□ -0.55
DDX41-218ENST00000625286 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 CCDC186Q7Z3E2 898 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 RABEPKQ7Z6M1 372 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 TMPRSS6Q8IU80 811 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 GOLGA5Q8TBA6 731 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 NDRG1Q92597 394 aaKnown RBP11.61□□□□□ -0.55
DDX41-218ENST00000625286 SEMA4DQ92854 862 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 DUSP16Q9BY84 665 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 FAM124BQ9H5Z6 455 aaPredicted RBP11.61□□□□□ -0.55
DDX41-218ENST00000625286 PRDM16Q9HAZ2 1276 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 TOR4AQ9NXH8 423 aa11.61□□□□□ -0.55
DDX41-218ENST00000625286 LSM7Q9UK45 103 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms