RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 PAPSS1O43252 624 aaPredicted RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 MSI1O43347 362 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 GREM1O60565 184 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 RNF40O75150 1001 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 APODP05090 189 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 SOX5P35711 763 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 CHKAP35790 457 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 OPRD1P41143 372 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 CXCL12P48061 93 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 SLC6A11P48066 632 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 RPL34P49207 117 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 SEC13P55735 322 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 KDSRQ06136 332 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 IQCB1Q15051 598 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 PREPLQ4J6C6 727 aaPredicted RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 OR6B2Q6IFH4 312 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 Q6ZNB5 142 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 APTXQ7Z2E3 356 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 SPEM1Q8N4L4 309 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 WDTC1Q8N5D0 677 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 CCDC26Q8TAB7 109 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 BHMTQ93088 406 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 XPO6Q96QU8 1125 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 CPXM1Q96SM3 734 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 PNKPQ96T60 521 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 ARHGEF4Q9NR80 690 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 WDR35Q9P2L0 1181 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 TJP2Q9UDY2 1190 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 AGO1Q9UL18 857 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 NAALADL1Q9UQQ1 740 aa14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 HBS1LQ9Y450 684 aaKnown RBP14.59□□□□□ -0.07
PCDHGC3-208ENST00000622836 HOXC11O43248 304 aaPredicted RBP14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 ATG13O75143 517 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 KLKB1P03952 638 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 CYBBP04839 570 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 SP9P0CG40 484 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 TYRP14679 529 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 EIF2DP41214 584 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 YWHAZP63104 245 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 ARID5AQ03989 594 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 GAB4Q2WGN9 574 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 MSANTD2Q6P1R3 559 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 TSSK4Q6SA08 328 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 NUDT18Q6ZVK8 323 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 NOP9Q86U38 636 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 C12orf40Q86WS4 652 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 MSANTD4Q8NCY6 345 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 EPS8L1Q8TE68 723 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 SERPINB11Q96P15 392 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 POPDC2Q9HBU9 364 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 RTN4Q9NQC3 1192 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 DNAJC17Q9NVM6 304 aaKnown RBP14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 DEC1Q9P2X7 70 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 FBXO4Q9UKT5 387 aa14.58□□□□□ -0.08
PCDHGC3-208ENST00000622836 MYOFQ9NZM1 2061 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 TBC1D3BA6NDS4 549 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 TEX33O43247 280 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 TULP3O75386 442 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 KAT7O95251 611 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 MMEP08473 750 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 TBX4P57082 545 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 JAM2P57087 298 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 SATB1Q01826 763 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 GAS6Q14393 721 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 TRIP4Q15650 581 aaPredicted RBP14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 PTPN20Q4JDL3 420 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 EFHC1Q5JVL4 640 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 ZC3H14Q6PJT7 736 aaKnown RBP14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 TOGARAM2Q6ZUX3 1019 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 FAM183BPQ6ZVS7 135 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 ERICH1Q86X53 443 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 ZNF677Q86XU0 584 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 RPLP0P6Q8NHW5 317 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 ADAM32Q8TC27 787 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 DQX1Q8TE96 717 aaKnown RBP14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 PRMT8Q9NR22 394 aaPredicted RBP14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 PLK2Q9NYY3 685 aa14.57□□□□□ -0.08
PCDHGC3-208ENST00000622836 HSF2BPO75031 334 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 GRAP2O75791 330 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 LSM8O95777 96 aaKnown RBP14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 ERBB2P04626 1255 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 FYNP06241 537 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 CCDC172P0C7W6 258 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 GRIA2P42262 883 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 SLC11A2P49281 568 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 CDR2Q01850 454 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 ZNF528Q3MIS6 628 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 C2orf27AQ580R0 203 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 DCAF6Q58WW2 860 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 NAA35Q5VZE5 725 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 NUGGCQ68CJ6 796 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 GRAMD4Q6IC98 578 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 UNC45BQ8IWX7 931 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 MAML2Q8IZL2 1156 aaPredicted RBP14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 DDI1Q8WTU0 396 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 SLC20A1Q8WUM9 679 aa14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 DDX1Q92499 740 aaKnown RBP14.56□□□□□ -0.08
PCDHGC3-208ENST00000622836 ACDQ96AP0 544 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms