RNA–Protein interactions for RNA: ENST00000622454.4

EPB42-210, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 1 (best) BASIC

Gene EPB42, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-210ENST00000622454 MAGEA9P43362 315 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 NDUFV1P49821 464 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 GBE1Q04446 702 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 SLC10A2Q12908 348 aaPredicted RBP14.5□□□□□ -0.09
EPB42-210ENST00000622454 MTM1Q13496 603 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 PKN2Q16513 984 aaKnown RBP14.5□□□□□ -0.09
EPB42-210ENST00000622454 UPP1Q16831 310 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 ANKS4BQ8N8V4 417 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 CD99L2Q8TCZ2 262 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 FBF1Q8TES7 1133 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 CKAP2Q8WWK9 683 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 SGSM3Q96HU1 749 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 TRABDQ9H4I3 376 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 PRDM16Q9HAZ2 1276 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 POPDC2Q9HBU9 364 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 SAMD15Q9P1V8 674 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 CDH9Q9ULB4 789 aa14.5□□□□□ -0.09
EPB42-210ENST00000622454 TIMM13Q9Y5L4 95 aaPredicted RBP14.5□□□□□ -0.09
EPB42-210ENST00000622454 CASTOR2A6NHX0 329 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 GOT1P17174 413 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 STX2P32856 288 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 ELK3P41970 407 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 BNIPLQ7Z465 357 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 PIGWQ7Z7B1 504 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 FAM35AQ86V20 835 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 PYROXD2Q8N2H3 581 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 PCED1BQ96HM7 432 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 SLC2A13Q96QE2 648 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 SMC6Q96SB8 1091 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 MLXIPLQ9NP71 852 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 ETNK2Q9NVF9 386 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 CHMP2BQ9UQN3 213 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 USP3Q9Y6I4 520 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 TEX264Q9Y6I9 313 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 M0QYT0 321 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 PRPF4O43172 522 aaKnown RBP eCLIP14.49□□□□□ -0.09
EPB42-210ENST00000622454 GCATO75600 419 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 AP1G2O75843 785 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 GHRP10912 638 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 PCSK1P29120 753 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 MAGEA6P43360 314 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 SLC18A1P54219 525 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 SYCP2LQ5T4T6 812 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 RNF187Q5TA31 235 aaPredicted RBP14.49□□□□□ -0.09
EPB42-210ENST00000622454 OTUD1Q5VV17 481 aaPredicted RBP14.49□□□□□ -0.09
EPB42-210ENST00000622454 NCBP2-AS2Q69YL0 99 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 KCNT2Q6UVM3 1135 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 BZW1Q7L1Q6 419 aaKnown RBP14.49□□□□□ -0.09
EPB42-210ENST00000622454 CCDC197Q8NCU1 140 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 KLHDC9Q8NEP7 349 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 GDAP1Q8TB36 358 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 MRRFQ96E11 262 aaKnown RBP14.49□□□□□ -0.09
EPB42-210ENST00000622454 QKIQ96PU8 341 aaKnown RBP eCLIP14.49□□□□□ -0.09
EPB42-210ENST00000622454 OSBPL7Q9BZF2 842 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 SRRDQ9UH36 339 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 PTCH2Q9Y6C5 1203 aa14.49□□□□□ -0.09
EPB42-210ENST00000622454 A0A0U1RQF3 1178 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 GOLGA6L7A0A1B0GV03 622 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 MYBPHLA2RUH7 354 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 TCP11X1B4DZS4 312 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 SPAG6O75602 509 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 APRTP07741 180 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 AMPD1P23109 780 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 CST5P28325 142 aaPredicted RBP14.48□□□□□ -0.09
EPB42-210ENST00000622454 PITX1P78337 314 aaPredicted RBP14.48□□□□□ -0.09
EPB42-210ENST00000622454 TIGD5Q53EQ6 642 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 SYPL2Q5VXT5 272 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 HEATR6Q6AI08 1181 aaKnown RBP14.48□□□□□ -0.09
EPB42-210ENST00000622454 CCSAPQ6IQ19 270 aaPredicted RBP14.48□□□□□ -0.09
EPB42-210ENST00000622454 ADGRD1Q6QNK2 874 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 CCDC121Q6ZUS5 278 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 VPS52Q8N1B4 723 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 PCSK9Q8NBP7 692 aaKnown RBP14.48□□□□□ -0.09
EPB42-210ENST00000622454 RNF169Q8NCN4 708 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 CCDC110Q8TBZ0 833 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 CYTH2Q99418 400 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 PAFAH2Q99487 392 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 SMOQ99835 787 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 PAAF1Q9BRP4 392 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 DHRS4Q9BTZ2 278 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 CNGB3Q9NQW8 809 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 DTLQ9NZJ0 730 aa14.48□□□□□ -0.09
EPB42-210ENST00000622454 SMG5Q9UPR3 1016 aaKnown RBP14.48□□□□□ -0.09
EPB42-210ENST00000622454 MGEA5O60502 916 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 ODC1P11926 461 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 HOXD10P28358 340 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 DEUP1Q05D60 604 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 EFTUD2Q15029 972 aaKnown RBP eCLIP14.47□□□□□ -0.09
EPB42-210ENST00000622454 IGDCC3Q8IVU1 814 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 LRRN4Q8WUT4 740 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 PPM1EQ8WY54 764 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 MAGEB18Q96M61 343 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 KCNK16Q96T55 309 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 ELAC2Q9BQ52 826 aaKnown RBP14.47□□□□□ -0.09
EPB42-210ENST00000622454 ULBP1Q9BZM6 244 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 RASSF4Q9H2L5 321 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 ETNK1Q9HBU6 452 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 ARHGEF4Q9NR80 690 aa14.47□□□□□ -0.09
EPB42-210ENST00000622454 MYO18AQ92614 2054 aaKnown RBP14.47□□□□□ -0.09
EPB42-210ENST00000622454 SYNJ2BP-COX16A0A087WUM0 186 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms