RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 DMRTB1Q96MA1 342 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 ZSWIM1Q9BR11 485 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 RSAD1Q9HA92 442 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 NUP50Q9UKX7 468 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 CNPP09543 421 aaKnown RBP11.91□□□□□ -0.5
CLTC-215ENST00000621829 NPR3P17342 541 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 NFX1Q12986 1120 aaKnown RBP11.91□□□□□ -0.5
CLTC-215ENST00000621829 ITGA9Q13797 1035 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 ACTRT1Q8TDG2 376 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 BARHL2Q9NY43 387 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 FLT1P17948 1338 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 MCAMP43121 646 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 CRKP46108 304 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 TUBA3CQ13748 450 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 PDXKO00764 312 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 ASMTLO95671 621 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 TTKP33981 857 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 SLC25A3Q00325 362 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 BTBD8Q5XKL5 378 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 ITFG1Q8TB96 612 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 FEZF2Q8TBJ5 459 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 KCTD4Q8WVF5 259 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 KIF12Q96FN5 646 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 MRPL4Q9BYD3 311 aaKnown RBP11.91□□□□□ -0.5
CLTC-215ENST00000621829 CMTM6Q9NX76 183 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 GSTK1Q9Y2Q3 226 aa11.91□□□□□ -0.5
CLTC-215ENST00000621829 CCRL2O00421 344 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 AP5Z1O43299 807 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 TUBA1BP68363 451 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 TUBA1AQ71U36 451 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 NAT14Q8WUY8 206 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 SP140LQ9H930 580 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 MARCH7Q9H992 704 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 TRIM3O75382 744 aaPredicted RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 ARF3P61204 181 aaPredicted RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 ARF1P84077 181 aaKnown RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 RHAGQ02094 409 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 BST2Q10589 180 aaKnown RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 MADCAM1Q13477 382 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 GSTA3Q16772 222 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 SNRNP48Q6IEG0 339 aaKnown RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 EFHD2Q96C19 240 aaPredicted RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 CCDC126Q96EE4 140 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 A0A087X0T9 212 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 UBE2QL1A1L167 161 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 ZBTB5O15062 677 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 GAS2O43903 313 aaKnown RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 FAM228BP0C875 321 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 NOS3P29474 1203 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 ATP13A5Q4VNC0 1218 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 PRMT9Q6P2P2 845 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 YTHDF3Q7Z739 585 aaKnown RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 DNAAF5Q86Y56 855 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 MRPL48Q96GC5 212 aaKnown RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 THAP1Q9NVV9 213 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 PADI4Q9UM07 663 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 UPP2O95045 317 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 TFRCP02786 760 aaKnown RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 BNC1Q01954 994 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 DDR1Q08345 913 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 TWF1Q12792 350 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 EML3Q32P44 896 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 ZNF614Q8N883 585 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 OTUD5Q96G74 571 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 NDUFAF1Q9Y375 327 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 SLC30A1Q9Y6M5 507 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 PIK3CDO00329 1044 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 GNB5O14775 395 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 HAT1O14929 419 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 OR6B1O95007 311 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 UNC5CO95185 931 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 ADSSP30520 456 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 GRIA3P42263 894 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 DHDDSQ86SQ9 333 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 CCDC185Q8N715 623 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 VMP1Q96GC9 406 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 C7orf25Q9BPX7 421 aa11.9□□□□□ -0.5
CLTC-215ENST00000621829 DNAAF2Q9NVR5 837 aaKnown RBP11.9□□□□□ -0.5
CLTC-215ENST00000621829 SF3B1O75533 1304 aaKnown RBP eCLIP11.9□□□□□ -0.53e-6■■■■■ 33
CLTC-215ENST00000621829 ECE2O60344 883 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 SMU1Q2TAY7 513 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 EDRF1Q3B7T1 1238 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 N4BP2L1Q5TBK1 243 aaPredicted RBP11.9□□□□□ -0.51
CLTC-215ENST00000621829 EMC1Q8N766 993 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 SLC4A9Q96Q91 983 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 LRMDAQ9H2I8 198 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 CUEDC1Q9NWM3 386 aaPredicted RBP11.9□□□□□ -0.51
CLTC-215ENST00000621829 BTG4Q9NY30 223 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 GRIK3Q13003 919 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 AP3B2Q13367 1082 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 SNX17Q15036 470 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 MTFR1Q15390 333 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 TFDP3Q5H9I0 405 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 SWSAP1Q6NVH7 229 aa11.9□□□□□ -0.51
CLTC-215ENST00000621829 SYTL5Q8TDW5 730 aaPredicted RBP11.9□□□□□ -0.51
CLTC-215ENST00000621829 ART5Q96L15 291 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms