RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 MYL7Q01449 175 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 PPM1KQ8N3J5 372 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 NCSTNQ92542 709 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 SCPEP1Q9HB40 452 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 HACD3Q9P035 362 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 STYXL1Q9Y6J8 313 aa12.53□□□□□ -0.4
SRRT-216ENST00000618262 ZC3H11AO75152 810 aaKnown RBP eCLIP12.52□□□□□ -0.42e-7■■■■■ 28.2
SRRT-216ENST00000618262 RHOXF2BP0C7M4 288 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 POLR2BP30876 1174 aaKnown RBP12.52□□□□□ -0.4
SRRT-216ENST00000618262 CDH8P55286 799 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 KCNMA1Q12791 1236 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 FAPQ12884 760 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 NR1I3Q14994 352 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 SPOUT1Q5T280 376 aaKnown RBP12.52□□□□□ -0.4
SRRT-216ENST00000618262 C3orf62Q6ZUJ4 267 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 ECHDC2Q86YB7 292 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 ABI1Q8IZP0 508 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 CARNMT1Q8N4J0 409 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 ARL8AQ96BM9 186 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 RHOXF2Q9BQY4 288 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 CERS4Q9HA82 394 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 TBCCD1Q9NVR7 557 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 LIMA1Q9UHB6 759 aaKnown RBP12.52□□□□□ -0.4
SRRT-216ENST00000618262 AGAP1Q9UPQ3 857 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 SIP14410 1827 aa12.52□□□□□ -0.4
SRRT-216ENST00000618262 A0A0U1RQF3 1178 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 RTCAO00442 366 aaKnown RBP12.52□□□□□ -0.41
SRRT-216ENST00000618262 PTGESO14684 152 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 GNA14O95837 355 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 IKBKEQ14164 716 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 ANKRD39Q53RE8 183 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 TJAP1Q5JTD0 557 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 CLLU1OSQ5K130 101 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 SIGIRRQ6IA17 410 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 MFSD5Q6N075 450 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 SLC24A5Q71RS6 500 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 FRMD5Q7Z6J6 570 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 SPATA2LQ8IUW3 424 aaPredicted RBP12.52□□□□□ -0.41
SRRT-216ENST00000618262 TMEM199Q8N511 208 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 GSTCDQ8NEC7 633 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 COG1Q8WTW3 980 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 AZIN2Q96A70 460 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 TSGA13Q96PP4 275 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 RSAD1Q9HA92 442 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
SRRT-216ENST00000618262 LGALS16A8MUM7 142 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 ITGB1P05556 798 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 WEE2P0C1S8 567 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 LSAMPQ13449 338 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 NR1D2Q14995 579 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 TMEM132DQ14C87 1099 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 FAM26DQ5JW98 314 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 OR52E8Q6IFG1 317 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 WDR93Q6P2C0 686 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 TRAPPC11Q7Z392 1133 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 C1orf127Q8N9H9 656 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 NOA1Q8NC60 698 aaKnown RBP12.51□□□□□ -0.41
SRRT-216ENST00000618262 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 SNF8Q96H20 258 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 MMS19Q96T76 1030 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 C12orf4Q9NQ89 552 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 CNGB3Q9NQW8 809 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 POLIQ9UNA4 740 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 TRIP11Q15643 1979 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 A0A1B0GTH6 734 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 TTC26A0AVF1 554 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 ITGA2BP08514 1039 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 PDHA1P08559 390 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 ATP2A2P16615 1042 aaKnown RBP12.51□□□□□ -0.41
SRRT-216ENST00000618262 CASP14P31944 242 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 CLCNKBP51801 687 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 RBL2Q08999 1139 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 EXOC3L4Q17RC7 722 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 WDR72Q3MJ13 1102 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 ARHGEF19Q8IW93 802 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 EHBP1Q8NDI1 1231 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 MFSD14AQ96MC6 490 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 FBXL18Q96ME1 805 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 WDR24Q96S15 920 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 LBHD1Q9BQE6 289 aaPredicted RBP12.51□□□□□ -0.41
SRRT-216ENST00000618262 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 MIS12Q9H081 205 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 C8orf4Q9NR00 106 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 EDARQ9UNE0 448 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 C9IYK1 514 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 ALADP13716 330 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 LSP1P33241 339 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 GRM5P41594 1212 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 OR1G1P47890 313 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 SERPINB8P50452 374 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 FXR1P51114 621 aaKnown RBP eCLIP12.51□□□□□ -0.41
SRRT-216ENST00000618262 TRPC3Q13507 836 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 EPC2Q52LR7 807 aa12.51□□□□□ -0.41
SRRT-216ENST00000618262 PDCD4Q53EL6 469 aaKnown RBP12.51□□□□□ -0.41
SRRT-216ENST00000618262 DEPDC1Q5TB30 811 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms