RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 BIN1O00499 593 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 TM4SF5O14894 197 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 CD19P15391 556 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 TBXAS1P24557 533 aaPredicted RBP23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 CORO1AP31146 461 aaKnown RBP23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 WASP42768 502 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 BST2Q10589 180 aaKnown RBP23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 MAP7D1Q3KQU3 841 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 FOXR2Q6PJQ5 311 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 C11orf74Q86VG3 221 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 ARHGAP18Q8N392 663 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 UBA3Q8TBC4 463 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 MARCH2Q9P0N8 246 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 FBXO10Q9UK96 956 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 AGO1Q9UL18 857 aaKnown RBP23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 CTNND2Q9UQB3 1225 aa23.3■■□□□ 1.32
NEDD4L-237ENST00000617539 RNF225M0QZC1 329 aaPredicted RBP23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 GABBR2O75899 941 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 CAVIN2O95810 425 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 PENKP01210 267 aaPredicted RBP23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 VDRP11473 427 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 HOXB2P14652 356 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 GABRG2P18507 467 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 NTSR1P30989 418 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 PPP1R2P41236 205 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 DGKGP49619 791 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 SLC8A3P57103 927 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 YWHAEP62258 255 aaKnown RBP23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 COG7P83436 770 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 ADIGQ0VDE8 80 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 CCDC40Q4G0X9 1142 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 PPM1JQ5JR12 505 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 STPG1Q5TH74 334 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 FYB2Q5VWT5 728 aa23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 TRMT11Q7Z4G4 463 aaKnown RBP23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 BCCIPQ9P287 314 aaKnown RBP eCLIP23.29■■□□□ 1.32
NEDD4L-237ENST00000617539 CALCAP01258 141 aa23.28■■□□□ 1.32
NEDD4L-237ENST00000617539 KIAA1211LQ6NV74 962 aa23.28■■□□□ 1.32
NEDD4L-237ENST00000617539 TMEM270Q6UE05 265 aa23.28■■□□□ 1.32
NEDD4L-237ENST00000617539 RSRC2Q7L4I2 434 aaKnown RBP23.28■■□□□ 1.32
NEDD4L-237ENST00000617539 NT5C1BQ96P26 610 aa23.28■■□□□ 1.32
NEDD4L-237ENST00000617539 HESX1Q9UBX0 185 aa23.28■■□□□ 1.32
NEDD4L-237ENST00000617539 SLC12A8A0AV02 714 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 YJEFN3A6XGL0 299 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 E7ENQ6 273 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 STX17P56962 302 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 LCLAT1Q6UWP7 414 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 NUDT18Q6ZVK8 323 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 DENND1CQ8IV53 801 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 ARHGEF19Q8IW93 802 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 TRIM59Q8IWR1 403 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 FAM217AQ8IXS0 508 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 PPM1KQ8N3J5 372 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 KCTD13Q8WZ19 329 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 ERLEC1Q96DZ1 483 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 GABRG3Q99928 467 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 LRRC4Q9HBW1 653 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 KIAA1257Q9ULG3 409 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 ZNF510Q9Y2H8 683 aa23.27■■□□□ 1.32
NEDD4L-237ENST00000617539 CNOT1A5YKK6 2376 aaKnown RBP23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 LNP1A1A4G5 178 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 PATE3B3GLJ2 98 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 PAEPP09466 180 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 SETSIPP0DME0 302 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 CYP2U1Q7Z449 544 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 TMEFF1Q8IYR6 380 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 CHPFQ8IZ52 775 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 PGBD3Q8N328 593 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 DCLK3Q9C098 648 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 CALCOCO1Q9P1Z2 691 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 STRIP2Q9ULQ0 834 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 CIZ1Q9ULV3 898 aaPredicted RBP23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 SLC27A6Q9Y2P4 619 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 PCDHB4Q9Y5E5 795 aa23.26■■□□□ 1.31
NEDD4L-237ENST00000617539 BICDL2A1A5D9 508 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 P4HA2O15460 535 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 ADRB1P08588 477 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 CHKAP35790 457 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 PTGER3P43115 390 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 DHPSP49366 369 aaPredicted RBP23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 ZNF132P52740 706 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 MFAP3P55082 362 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 MARSP56192 900 aaKnown RBP23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 TRIP4Q15650 581 aaPredicted RBP23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 GEN1Q17RS7 908 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 BSPRYQ5W0U4 402 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 PMF1Q6P1K2 205 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 RRAGAQ7L523 313 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 SLC35F5Q8WV83 523 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 EDEM1Q92611 657 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 PLD4Q96BZ4 506 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 SPACA7Q96KW9 195 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 IPO9Q96P70 1041 aaKnown RBP23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 EDEM2Q9BV94 578 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 CACNA2D2Q9NY47 1150 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 CLEC4EQ9ULY5 219 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 RAD54BQ9Y620 910 aa23.25■■□□□ 1.31
NEDD4L-237ENST00000617539 WASH3PC4AMC7 463 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms