RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 SLC13A1Q9BZW2 595 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 RBM38Q9H0Z9 239 aaKnown RBP16.1■□□□□ 0.17
GPN1-212ENST00000616939 ETNK2Q9NVF9 386 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 USP18Q9UMW8 372 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 PCDHA11Q9Y5I1 949 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 TESPA1A2RU30 521 aaPredicted RBP16.1■□□□□ 0.17
GPN1-212ENST00000616939 H7C0C1 242 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 K7ERI5 159 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 VILLO15195 856 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 SPATA31D3P0C874 917 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 ATP5OP48047 213 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 SLC1A6P48664 564 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 MTM1Q13496 603 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 ADRM1Q16186 407 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 INSCQ1MX18 579 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 RALGPS1Q5JS13 557 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 ARHGEF16Q5VV41 709 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 KLC3Q6P597 504 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 FBXL19Q6PCT2 694 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 ABHD15Q6UXT9 468 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 ZPBP2Q6X784 338 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 SPATA31D4Q6ZUB0 917 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 DDI1Q8WTU0 396 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 SIGLEC10Q96LC7 697 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 RTKNQ9BST9 563 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 APOL6Q9BWW8 343 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 SMYD3Q9H7B4 428 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 TIMMDC1Q9NPL8 285 aa16.1■□□□□ 0.17
GPN1-212ENST00000616939 PRPF19Q9UMS4 504 aaKnown RBP16.1■□□□□ 0.17
GPN1-212ENST00000616939 ZNF487B1APH4 448 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 AVILO75366 819 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 TOM1L1O75674 476 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 MYL6P60660 151 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 TTLL12Q14166 644 aaPredicted RBP16.09■□□□□ 0.17
GPN1-212ENST00000616939 PDK2Q15119 407 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
GPN1-212ENST00000616939 PDPK2PQ6A1A2 396 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 SWSAP1Q6NVH7 229 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 SAMD1Q6SPF0 538 aaPredicted RBP16.09■□□□□ 0.17
GPN1-212ENST00000616939 DENND5BQ6ZUT9 1274 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 TRMT1LQ7Z2T5 733 aaKnown RBP16.09■□□□□ 0.17
GPN1-212ENST00000616939 PQLC1Q8N2U9 271 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 SHKBP1Q8TBC3 707 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 CDHR1Q96JP9 859 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 RNF157Q96PX1 679 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 TARS2Q9BW92 718 aaKnown RBP16.09■□□□□ 0.17
GPN1-212ENST00000616939 HSFX1Q9UBD0 423 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 CYTH4Q9UIA0 394 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 EMCNQ9ULC0 261 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 DMTF1Q9Y222 760 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
GPN1-212ENST00000616939 TCP10L2B9ZVM9 353 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 ZNF195O14628 629 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 UGT1A9O60656 530 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 PLIN3O60664 434 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 CST3P01034 146 aaPredicted RBP16.08■□□□□ 0.17
GPN1-212ENST00000616939 ASNSP08243 561 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 FAM200BP0CF97 657 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 ASPAP45381 313 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 ALDH1A3P47895 512 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 HSPA13P48723 471 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 HARS2P49590 506 aaKnown RBP16.08■□□□□ 0.17
GPN1-212ENST00000616939 IDH3AP50213 366 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 EPHB1P54762 984 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 HPCAP84074 193 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 FSCBQ5H9T9 825 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 ZFP1Q6P2D0 407 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 NPNTQ6UXI9 565 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 CYP4V2Q6ZWL3 525 aaPredicted RBP16.08■□□□□ 0.17
GPN1-212ENST00000616939 CCDC60Q8IWA6 550 aaPredicted RBP16.08■□□□□ 0.17
GPN1-212ENST00000616939 PPP4R1Q8TF05 950 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 STON2Q8WXE9 905 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 SLC7A3Q8WY07 619 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 HSPH1Q92598 858 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 DCUN1D1Q96GG9 259 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 CATSPER2Q96P56 530 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 CALN1Q9BXU9 219 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 GLIS2Q9BZE0 524 aaPredicted RBP16.08■□□□□ 0.17
GPN1-212ENST00000616939 UGT1A7Q9HAW7 530 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 UGT1A10Q9HAW8 530 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 UGT1A8Q9HAW9 530 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 RAVER2Q9HCJ3 691 aaKnown RBP16.08■□□□□ 0.17
GPN1-212ENST00000616939 THEGQ9P2T0 379 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 ZNF70Q9UC06 446 aaPredicted RBP16.08■□□□□ 0.17
GPN1-212ENST00000616939 VPS28Q9UK41 221 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 ARHGAP26Q9UNA1 814 aa16.08■□□□□ 0.17
GPN1-212ENST00000616939 TOMM70O94826 608 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 PROCP04070 461 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 CAPNS1P04632 268 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 TFAP2AP05549 437 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 SUPT20HL2P0C7V6 817 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 CPA3P15088 417 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 NUMBP49757 651 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 ZNF143P52747 638 aaPredicted RBP16.08■□□□□ 0.16
GPN1-212ENST00000616939 CDH6P55285 790 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 USP46P62068 366 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 APOFQ13790 326 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 SUPT20HL1Q3ZLR7 823 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 MTERF2Q49AM1 385 aa16.08■□□□□ 0.16
GPN1-212ENST00000616939 ZNF534Q76KX8 674 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms