RNA–Protein interactions for RNA: ENST00000616552.4

MCM3-207, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-207ENST00000616552 TKFCQ3LXA3 575 aa9.79□□□□□ -0.84
MCM3-207ENST00000616552 TTC13Q8NBP0 860 aa9.79□□□□□ -0.84
MCM3-207ENST00000616552 MASTLQ96GX5 879 aa9.79□□□□□ -0.84
MCM3-207ENST00000616552 ARMC7Q9H6L4 198 aa9.79□□□□□ -0.84
MCM3-207ENST00000616552 NXF1Q9UBU9 619 aaKnown RBP9.79□□□□□ -0.84
MCM3-207ENST00000616552 NOP56O00567 594 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 STAMBPO95630 424 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 SERPINA6P08185 405 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 MAPTP10636 758 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 KDELR1P24390 212 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 RBL1P28749 1068 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 MS4A2Q01362 244 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 GRM2Q14416 872 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 ZACNQ401N2 412 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 PTPN20Q4JDL3 420 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 TMEM198Q66K66 360 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 IL31Q6EBC2 164 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 B3GNT6Q6ZMB0 384 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 CMC1Q7Z7K0 106 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 SLC26A11Q86WA9 606 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 STKLD1Q8NE28 680 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 PRMT6Q96LA8 375 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 PEBP4Q96S96 227 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 RAVER2Q9HCJ3 691 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 GABBR1Q9UBS5 961 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 TMCO1Q9UM00 188 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 DRG1Q9Y295 367 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 WDR64B1ANS9 1081 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 IMPDH2P12268 514 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 P4HA1P13674 534 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 XRCC1P18887 633 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 LIG4P49917 911 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 IDH3AP50213 366 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 SH3BGRP55822 239 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 MYL6P60660 151 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 SLC25A11Q02978 314 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 MTERF2Q49AM1 385 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 DNAL1Q4LDG9 190 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 SLC9B1Q4ZJI4 515 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 N4BP2L1Q5TBK1 243 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 UNC5AQ6ZN44 842 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 CAND1Q86VP6 1230 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.78□□□□□ -0.84
MCM3-207ENST00000616552 GMCL1Q96IK5 515 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 TSPYL2Q9H2G4 693 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 AGO4Q9HCK5 861 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 SIRPGQ9P1W8 387 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 EMCNQ9ULC0 261 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 CCPG1Q9ULG6 757 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 GNEQ9Y223 722 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 PCDHGA4Q9Y5G9 962 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 SF3B1O75533 1304 aaKnown RBP eCLIP9.78□□□□□ -0.843e-7■■■■■ 108
MCM3-207ENST00000616552 CCDC78A2IDD5 438 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 E7ESA3 106 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 TMCC1O94876 653 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 BPGMP07738 259 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 VARSP26640 1264 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 SLC1A6P48664 564 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 ENTPD1P49961 510 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 DBN1Q16643 649 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 C1QTNF12Q5T7M4 302 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 TEDDM1Q5T9Z0 273 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 TTC39BQ5VTQ0 682 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 PDPK2PQ6A1A2 396 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 ITPRIPL1Q6GPH6 555 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 SWSAP1Q6NVH7 229 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 CASC4Q6P4E1 433 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 TRIM72Q6ZMU5 477 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 ANKRD23Q86SG2 305 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 PHF13Q86YI8 300 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 C12orf56Q8IXR9 622 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 PPP4R1Q8TF05 950 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 LENG8Q96PV6 779 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 OR52B2Q96RD2 323 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 MTMR12Q9C0I1 747 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 SSU72Q9NP77 194 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 RBAKQ9NYW8 714 aaPredicted RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 GMPR2Q9P2T1 348 aaKnown RBP9.78□□□□□ -0.84
MCM3-207ENST00000616552 FBXO40Q9UH90 709 aa9.78□□□□□ -0.84
MCM3-207ENST00000616552 PLOD2O00469 737 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 SNRPAP09012 282 aaKnown RBP9.77□□□□□ -0.84
MCM3-207ENST00000616552 EPHA3P29320 983 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 SOX11P35716 441 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 PHKA2P46019 1235 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 NUDT2P50583 147 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 CLCN2P51788 898 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 THOP1P52888 689 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 FSTL1Q12841 308 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 ITGA9Q13797 1035 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 SCYL2Q6P3W7 929 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 C15orf39Q6ZRI6 1047 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 ALKBH8Q96BT7 664 aaKnown RBP9.77□□□□□ -0.84
MCM3-207ENST00000616552 C7orf26Q96N11 449 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 CPXM1Q96SM3 734 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 PKP2Q99959 881 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 FOXP3Q9BZS1 431 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 PPCSQ9HAB8 311 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.77□□□□□ -0.84
MCM3-207ENST00000616552 KCND2Q9NZV8 630 aa9.77□□□□□ -0.84
MCM3-207ENST00000616552 HMGXB4Q9UGU5 601 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms