RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 NUDT18Q6ZVK8 323 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 DDX42Q86XP3 938 aaKnown RBP eCLIP18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 NT5DC4Q86YG4 428 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 GUF1Q8N442 669 aaKnown RBP18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 FAM84AQ96KN4 292 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 CEP295NLQ96MC4 621 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 STRA6Q9BX79 667 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 ST6GALNAC4Q9H4F1 302 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 FANCLQ9NW38 375 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 GDAP2Q9NXN4 497 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 SEL1LQ9UBV2 794 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 BTBD3Q9Y2F9 522 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 STYXL1Q9Y6J8 313 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 MYOFQ9NZM1 2061 aa18.6■□□□□ 0.57
TRAPPC3-209ENST00000616395 FLRT2O43155 660 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 PRPF6O94906 941 aaKnown RBP18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 ANXA13P27216 316 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 CD6P30203 668 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 PRCPP42785 496 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 UBASH3AP57075 661 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 SMAD1Q15797 465 aaKnown RBP18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 SOWAHAQ2M3V2 549 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 ANO4Q32M45 955 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 CCDC157Q569K6 752 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 TMEM25Q86YD3 366 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 LRRC52Q8N7C0 313 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 LSM14AQ8ND56 463 aaKnown RBP18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 ZSWIM2Q8NEG5 633 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 GABRG3Q99928 467 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 SYT15Q9BQS2 421 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 CRTAC1Q9NQ79 661 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 EHD2Q9NZN4 543 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 IMPACTQ9P2X3 320 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 ZNF462Q96JM2 2506 aa18.59■□□□□ 0.57
TRAPPC3-209ENST00000616395 J3QKU1 62 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 LMO2P25791 158 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 NOP14P78316 857 aaKnown RBP18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 CYP27A1Q02318 531 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 LRRC63Q05C16 580 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 TAF10Q12962 218 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 FOXR2Q6PJQ5 311 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 CSGALNACT2Q8N6G5 542 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 TOP6BLQ8N6T0 577 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 CXorf38Q8TB03 319 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 OTUB2Q96DC9 234 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 TOE1Q96GM8 510 aaKnown RBP18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 GPR174Q9BXC1 333 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 THAP9Q9H5L6 903 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 SPHK2Q9NRA0 654 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 OLFML3Q9NRN5 406 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 PCDHGB2Q9Y5G2 931 aa18.58■□□□□ 0.57
TRAPPC3-209ENST00000616395 MYO18AQ92614 2054 aaKnown RBP18.58■□□□□ 0.56
TRAPPC3-209ENST00000616395 F8VP50 259 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 NCAM1P13591 858 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 MSNP26038 577 aaKnown RBP18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 ADSSP30520 456 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 STX17P56962 302 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 GSDMDP57764 484 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 GRAMD4Q6IC98 578 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 IL27RAQ6UWB1 636 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 BBS7Q8IWZ6 715 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 POMGNT1Q8WZA1 660 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 HVCN1Q96D96 273 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 ZFRQ96KR1 1074 aaKnown RBP18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 SLC39A2Q9NP94 309 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 WSB2Q9NYS7 404 aaPredicted RBP18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 IFNKQ9P0W0 207 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 CDH9Q9ULB4 789 aa18.57■□□□□ 0.56
TRAPPC3-209ENST00000616395 PLK4O00444 970 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 TRIM66O15016 1216 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 BCAT2O15382 392 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 KRT19P08727 400 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 HLA-EP13747 358 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 EEF1GP26641 437 aaKnown RBP18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 EIF2S3P41091 472 aaKnown RBP18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 ALCAMQ13740 583 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 DHRS13Q6UX07 377 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 SMYD4Q8IYR2 804 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 KBTBD7Q8WVZ9 684 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 SAAL1Q96ER3 474 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 PCED1BQ96HM7 432 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 FCRL3Q96P31 734 aaPredicted RBP18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 ACCSQ96QU6 501 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 FAM213AQ9BRX8 229 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 DNAJC17Q9NVM6 304 aaKnown RBP18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 SH3BP1Q9Y3L3 701 aa18.56■□□□□ 0.56
TRAPPC3-209ENST00000616395 WASH3PC4AMC7 463 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 PRRT4C9JH25 899 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 E9PAM4 449 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 COCHO43405 550 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 TNFSF14O43557 240 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 TLX3O43711 291 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 TPM1P09493 284 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 PDGFRBP09619 1106 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 CD44P16070 742 aaKnown RBP18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 ABCD1P33897 745 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 HOXD13P35453 343 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 IFRD2Q12894 506 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 MAPRE1Q15691 268 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms