RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 RABGAP1Q9Y3P9 1069 aa3.05□□□□□ -1.92
HMGB1P24-202ENST00000615653 WDR17Q8IZU2 1322 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 SMIM35A0A1B0GVV1 85 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 TCRBV5S1A1TA0A578 114 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 BICDL2A1A5D9 508 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 DSCR3O14972 297 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 TOP3BO95985 862 aaKnown RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 MT-CO3P00414 261 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 A1BGP04217 495 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 CYP2A6P11509 494 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 IL1R1P14778 569 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 RHCEP18577 417 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 MMP13P45452 471 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 DIO1P49895 249 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 LINC00205P59089 165 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 PSG6Q00889 435 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 FMO1Q01740 532 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 RHDQ02161 417 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 LMAN2Q12907 356 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 PICALMQ13492 652 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 SEMA5AQ13591 1074 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 MORC3Q14149 939 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 ZNF268Q14587 947 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 DAZAP2Q15038 168 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 TRIP6Q15654 476 aaKnown RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 SUPT20HL1Q3ZLR7 823 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 INO80DQ53TQ3 878 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 C3orf38Q5JPI3 329 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 C10orf62Q5T681 223 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 PXDC1Q5TGL8 231 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 ANO7Q6IWH7 933 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 VSTM1Q6UX27 236 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 SESTD1Q86VW0 696 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 KRT73Q86Y46 540 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 ENAHQ8N8S7 591 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 ZNF398Q8TD17 642 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 CUL5Q93034 780 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 TTC17Q96AE7 1141 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 ZC3H10Q96K80 434 aaKnown RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 CCDC17Q96LX7 622 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 SCLT1Q96NL6 688 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 STRBPQ96SI9 672 aaKnown RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 QTRT1Q9BXR0 403 aaKnown RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 UNKQ9C0B0 810 aaKnown RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 CHST8Q9H2A9 424 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 PPCSQ9HAB8 311 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 AS3MTQ9HBK9 375 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 OBP2AQ9NY56 170 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 DNAJB11Q9UBS4 358 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 DKK4Q9UBT3 224 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 NKX1-2Q9UD57 310 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 STEAP1Q9UHE8 339 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 DDX20Q9UHI6 824 aaKnown RBP3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 RIMKLBQ9ULI2 386 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 GTF2A1LQ9UNN4 478 aa3.04□□□□□ -1.92
HMGB1P24-202ENST00000615653 RPGRIP1LQ68CZ1 1315 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 KCNU1A8MYU2 1149 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 E5RJQ4 531 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 RAB27BO00194 218 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 SPRY2O43597 315 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 SNX2O60749 519 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 APEHP13798 732 aaKnown RBP3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 CREB1P16220 341 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 ADRA1DP25100 572 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 IL1R2P27930 398 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 RBL1P28749 1068 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 GATMP50440 423 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 ALDH5A1P51649 535 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 TXNL4AP83876 142 aaKnown RBP3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 PDE1CQ14123 709 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 GRM3Q14832 879 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 DGKKQ5KSL6 1271 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 MEX3CQ5U5Q3 659 aaKnown RBP3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 ANO1Q5XXA6 986 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 TMEM65Q6PI78 240 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 DCDC5Q6ZRR9 648 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 CREBRFQ8IUR6 639 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 CNGA4Q8IV77 575 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 PNPLA1Q8N8W4 532 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 PRSS3P2Q8NHM4 247 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 HIC2Q96JB3 615 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 VPS50Q96JG6 964 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 PDGFCQ9NRA1 345 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 ASIC5Q9NY37 505 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 PI4KBQ9UBF8 816 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 ZNF212Q9UDV6 495 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 VPS51Q9UID3 782 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 ITGB1BP2Q9UKP3 347 aa3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 SCAF8Q9UPN6 1271 aaKnown RBP3.03□□□□□ -1.92
HMGB1P24-202ENST00000615653 TCEA3O75764 348 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 RNASEH2AO75792 299 aaKnown RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 MT-ND5P03915 603 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 ANXA2P07355 339 aaKnown RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 PARP1P09874 1014 aaKnown RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 HGFP14210 728 aa3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 BTF3P20290 206 aaKnown RBP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 SFPQP23246 707 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB1P24-202ENST00000615653 ATP5F1P24539 256 aaPredicted RBP3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms