RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 FAM149B1Q96BN6 582 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 TPSD1Q9BZJ3 242 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 LRRC4Q9HBW1 653 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 TLR8Q9NR97 1041 aaKnown RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 ANO10Q9NW15 660 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 ATMINO43313 823 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 RTN3O95197 1032 aaPredicted RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 SP9P0CG40 484 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 NCAM1P13591 858 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 PDCLQ13371 301 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 ARHGAP29Q52LW3 1261 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 TMEM196Q5HYL7 178 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 RSRC2Q7L4I2 434 aaKnown RBP5.97□□□□□ -1.45
CPNE3-208ENST00000614678 ALLCQ8N6M5 410 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 NETO2Q8NC67 525 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 OR52K2Q8NGK3 314 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 MARCH2Q9P0N8 246 aa5.97□□□□□ -1.45
CPNE3-208ENST00000614678 SPAG17Q6Q759 2223 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 CHURC1-FNTBB4DL54 471 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 K7ESF4 209 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 P4HA2O15460 535 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 TULP3O75386 442 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 PLEKP08567 350 aaPredicted RBP5.96□□□□□ -1.45
CPNE3-208ENST00000614678 SKILP12757 684 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 FNTBP49356 437 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 ENPEPQ07075 957 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 GEN1Q17RS7 908 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 KIAA1211LQ6NV74 962 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 FOXR2Q6PJQ5 311 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 Q6ZNB5 142 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 TAC4Q86UU9 113 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 PHTF2Q8N3S3 785 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 EPS8L1Q8TE68 723 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 CLDN23Q96B33 292 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 TRIM7Q9C029 511 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 NUCKS1Q9H1E3 243 aaKnown RBP5.96□□□□□ -1.45
CPNE3-208ENST00000614678 CAAP1Q9H8G2 361 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 HESX1Q9UBX0 185 aa5.96□□□□□ -1.45
CPNE3-208ENST00000614678 NOCTQ9UK39 431 aaKnown RBP5.96□□□□□ -1.45
CPNE3-208ENST00000614678 FANCMQ8IYD8 2048 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 TMCO5BA8MYB1 307 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 SGK1O00141 431 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 ADAM23O75077 832 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 MBD3O95983 291 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 PAEPP09466 180 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 CDK11BP21127 795 aaKnown RBP5.96□□□□□ -1.46
CPNE3-208ENST00000614678 PPP1R2P41236 205 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 IFNAR2P48551 515 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 MFAP3P55082 362 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 RPS24P62847 133 aaKnown RBP5.96□□□□□ -1.46
CPNE3-208ENST00000614678 FSCBQ5H9T9 825 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 NAA35Q5VZE5 725 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 GAS2L3Q86XJ1 694 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 SIX6OS1Q8N1H7 587 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 DEFB119Q8N690 84 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 CPLX3Q8WVH0 158 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 P2RY13Q9BPV8 354 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 FBXO44Q9H4M3 255 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 LIMA1Q9UHB6 759 aaKnown RBP5.96□□□□□ -1.46
CPNE3-208ENST00000614678 AKAP13Q12802 2813 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 GOLGA8SH3BPF8 625 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 HRO43593 1189 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 TDGF1P13385 188 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 TYRP14679 529 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 FLT3P36888 993 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 JAM2P57087 298 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 FMO1Q01740 532 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 PFKPQ01813 784 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 ZC3H12AQ5D1E8 599 aaKnown RBP5.96□□□□□ -1.46
CPNE3-208ENST00000614678 ETFBKMTQ8IXQ9 262 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 DQX1Q8TE96 717 aaKnown RBP5.96□□□□□ -1.46
CPNE3-208ENST00000614678 DNASE1L2Q92874 299 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 PRICKLE1Q96MT3 831 aaPredicted RBP5.96□□□□□ -1.46
CPNE3-208ENST00000614678 SLC4A5Q9BY07 1137 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 SPHK2Q9NRA0 654 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 RXFP3Q9NSD7 469 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 SH3BP1Q9Y3L3 701 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 DMXL2Q8TDJ6 3036 aa5.96□□□□□ -1.46
CPNE3-208ENST00000614678 LGALS16A8MUM7 142 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 RNF103O00237 685 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 ADH5P11766 374 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 PRKCQQ04759 706 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 DCAF6Q58WW2 860 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 FAM133BQ5BKY9 247 aaKnown RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 ARTNQ5T4W7 220 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 BTBD8Q5XKL5 378 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 EGFLAMQ63HQ2 1017 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 CPNE8Q86YQ8 564 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 DEFB106AQ8N104 65 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 PCMTD1Q96MG8 357 aaPredicted RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 BBS2Q9BXC9 721 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 DNMT3LQ9UJW3 386 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 ACTL7AQ9Y615 435 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 KIAA1549LQ6ZVL6 1849 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 LTFP02788 710 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 HLA-EP13747 358 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 EEF1GP26641 437 aaKnown RBP5.95□□□□□ -1.46
CPNE3-208ENST00000614678 MRE11P49959 708 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 CENPCQ03188 943 aa5.95□□□□□ -1.46
CPNE3-208ENST00000614678 CETN1Q12798 172 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms