RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 FAM131BQ86XD5 332 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 ELMOD1Q8N336 334 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 HDAC7Q8WUI4 952 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 CASP10Q92851 521 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 MRPL38Q96DV4 380 aaKnown RBP14.33□□□□□ -0.11
TMEM254-213ENST00000613758 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.33□□□□□ -0.11
TMEM254-213ENST00000613758 SFMBT1Q9UHJ3 866 aa14.33□□□□□ -0.11
TMEM254-213ENST00000613758 PDE4DIPQ5VU43 2346 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 MYO7AQ13402 2215 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 ZNF840PA6NDX5 716 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 ZRANB2O95218 330 aaKnown RBP eCLIP14.33□□□□□ -0.12
TMEM254-213ENST00000613758 RARAP10276 462 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 GBP1P32455 592 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 PPP3CCP48454 512 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 NRIP1P48552 1158 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 SNX30Q5VWJ9 437 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 AADACL2Q6P093 401 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 MSANTD2Q6P1R3 559 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 CYP4V2Q6ZWL3 525 aaPredicted RBP14.33□□□□□ -0.12
TMEM254-213ENST00000613758 SND1Q7KZF4 910 aaKnown RBP eCLIP14.33□□□□□ -0.12
TMEM254-213ENST00000613758 RCOR2Q8IZ40 523 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 EXD1Q8NHP7 514 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 HSPH1Q92598 858 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 ACSF2Q96CM8 615 aaPredicted RBP14.33□□□□□ -0.12
TMEM254-213ENST00000613758 SMOC2Q9H3U7 446 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 ZNF334Q9HCZ1 680 aaPredicted RBP14.33□□□□□ -0.12
TMEM254-213ENST00000613758 OLA1Q9NTK5 396 aaKnown RBP14.33□□□□□ -0.12
TMEM254-213ENST00000613758 DPP7Q9UHL4 492 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 TTC7AQ9ULT0 858 aaPredicted RBP14.33□□□□□ -0.12
TMEM254-213ENST00000613758 HCFC2Q9Y5Z7 792 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 MYO16Q9Y6X6 1858 aa14.33□□□□□ -0.12
TMEM254-213ENST00000613758 ZNF638Q14966 1978 aaKnown RBP14.32□□□□□ -0.12
TMEM254-213ENST00000613758 CCL16O15467 120 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 RFPL2O75678 378 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 TBX18O95935 607 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 IGLV3-25P01717 112 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 KRT1P04264 644 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 DUSP6Q16828 381 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 ODF2Q5BJF6 829 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 C10orf120Q5SQS8 335 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 TEKT4Q8WW24 435 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 RAPGEF5Q92565 580 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 RNF25Q96BH1 459 aaPredicted RBP14.32□□□□□ -0.12
TMEM254-213ENST00000613758 ZNF576Q9H609 170 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 CCSER2Q9H7U1 834 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 WDR6Q9NNW5 1121 aaKnown RBP14.32□□□□□ -0.12
TMEM254-213ENST00000613758 KLHL11Q9NVR0 708 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 COL4A4P53420 1690 aaPredicted RBP14.32□□□□□ -0.12
TMEM254-213ENST00000613758 LAMA2P24043 3122 aaKnown RBP14.32□□□□□ -0.12
TMEM254-213ENST00000613758 PI4K2BG5E9Z4 385 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 TLR5O60602 858 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 F11P03951 625 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 LRIT3Q3SXY7 679 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 PABPC1LQ4VXU2 614 aaKnown RBP14.32□□□□□ -0.12
TMEM254-213ENST00000613758 ERMARDQ5T6L9 678 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 SEL1L2Q5TEA6 688 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 HS6ST3Q8IZP7 471 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 ZNF276Q8N554 614 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 CCDC185Q8N715 623 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 KCTD6Q8NC69 237 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 CMASQ8NFW8 434 aaPredicted RBP14.32□□□□□ -0.12
TMEM254-213ENST00000613758 RNF34Q969K3 372 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 LRRC1Q9BTT6 524 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 IL21Q9HBE4 155 aa14.32□□□□□ -0.12
TMEM254-213ENST00000613758 A0A1W2PPC1 479 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 LRRD1A4D1F6 860 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 PGRMC1O00264 195 aaKnown RBP14.31□□□□□ -0.12
TMEM254-213ENST00000613758 IRAK2O43187 625 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 HNRNPA1P09651 372 aaKnown RBP eCLIP14.31□□□□□ -0.12
TMEM254-213ENST00000613758 CXCR3P49682 368 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 VSNL1P62760 191 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 EFEMP1Q12805 493 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 EIF4EBP2Q13542 120 aaPredicted RBP14.31□□□□□ -0.12
TMEM254-213ENST00000613758 HECTD3Q5T447 861 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 ELMSAN1Q6PJG2 1045 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 TMEM150AQ86TG1 271 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 CCDC50Q8IVM0 306 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 RBM41Q96IZ5 413 aaKnown RBP14.31□□□□□ -0.12
TMEM254-213ENST00000613758 SERPINB11Q96P15 392 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 CDK5RAP1Q96SZ6 601 aaKnown RBP14.31□□□□□ -0.12
TMEM254-213ENST00000613758 SNRNP25Q9BV90 132 aaKnown RBP14.31□□□□□ -0.12
TMEM254-213ENST00000613758 LRRC3Q9BY71 257 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 WDCPQ9H6R7 721 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.31□□□□□ -0.12
TMEM254-213ENST00000613758 GPATCH2LQ9NWQ4 482 aa14.31□□□□□ -0.12
TMEM254-213ENST00000613758 MTCL1Q9Y4B5 1905 aaKnown RBP14.3□□□□□ -0.12
TMEM254-213ENST00000613758 TARSL2A2RTX5 802 aaKnown RBP14.3□□□□□ -0.12
TMEM254-213ENST00000613758 MDM4O15151 490 aa14.3□□□□□ -0.12
TMEM254-213ENST00000613758 MSI1O43347 362 aaKnown RBP14.3□□□□□ -0.12
TMEM254-213ENST00000613758 KDELR1P24390 212 aa14.3□□□□□ -0.12
TMEM254-213ENST00000613758 HOXA9P31269 272 aa14.3□□□□□ -0.12
TMEM254-213ENST00000613758 ATP5C1P36542 298 aaKnown RBP14.3□□□□□ -0.12
TMEM254-213ENST00000613758 ZC3H12AQ5D1E8 599 aaKnown RBP14.3□□□□□ -0.12
TMEM254-213ENST00000613758 WDR93Q6P2C0 686 aa14.3□□□□□ -0.12
TMEM254-213ENST00000613758 TADA2BQ86TJ2 420 aa14.3□□□□□ -0.12
TMEM254-213ENST00000613758 TMC8Q8IU68 726 aa14.3□□□□□ -0.12
TMEM254-213ENST00000613758 PPP2R3CQ969Q6 453 aa14.3□□□□□ -0.12
TMEM254-213ENST00000613758 CDCA3Q99618 268 aaPredicted RBP14.3□□□□□ -0.12
TMEM254-213ENST00000613758 CORO1BQ9BR76 489 aa14.3□□□□□ -0.12
TMEM254-213ENST00000613758 ZNF446Q9NWS9 450 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms