RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	COBLL1	Q53SF7	1204 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	ARHGAP17	Q68EM7	881 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	TOGARAM2	Q6ZUX3	1019 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	METTL3	Q86U44	580 aa	Known RBP	11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	CHPF	Q8IZ52	775 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	PGBD3	Q8N328	593 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	ARHGAP18	Q8N392	663 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	SLC4A11	Q8NBS3	891 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	SPRYD3	Q8NCJ5	442 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	IPO4	Q8TEX9	1081 aa	Known RBP	11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	SEMA4D	Q92854	862 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	JAKMIP2	Q96AA8	810 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	ACOX2	Q99424	681 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	DCLK3	Q9C098	648 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	GOLPH3L	Q9H4A5	285 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	CAPN10	Q9HC96	672 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	CISH	Q9NSE2	258 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	RAB20	Q9NX57	234 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	COQ4	Q9Y3A0	265 aa		11.7	□□□□□ -0.54
CBWD1-222	ENST00000613508	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	MDM4	O15151	490 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	ZBTB24	O43167	697 aa	Predicted RBP	11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	SERPINF2	P08697	491 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	ENG	P17813	658 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	NDUFV2	P19404	249 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	MXI1	P50539	228 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	RPL6	Q02878	288 aa	Known RBP	11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	ZNF252P-AS1	Q0IIN9	211 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	SEMA3B	Q13214	749 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	E2F5	Q15329	346 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	DUOXA1	Q1HG43	343 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	FYB2	Q5VWT5	728 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	PM20D1	Q6GTS8	502 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	KIAA1211L	Q6NV74	962 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	TPGS1	Q6ZTW0	290 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	PIP4P1	Q86T03	277 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	ANKRD52	Q8NB46	1076 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	P2RY11	Q96G91	374 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	CCDC34	Q96HJ3	373 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	TMEM176A	Q96HP8	235 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	MRGPRX1	Q96LB2	322 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	HEXIM2	Q96MH2	286 aa	Known RBP	11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	SLC6A14	Q9UN76	642 aa		11.69	□□□□□ -0.54
CBWD1-222	ENST00000613508	CETN3	O15182	167 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	PROS1	P07225	676 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	C7	P10643	843 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	MFAP3	P55082	362 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	ZNF33A	Q06730	810 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	ARMCX6	Q7L4S7	300 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	PIGZ	Q86VD9	579 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	FAM217A	Q8IXS0	508 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	CPXM2	Q8N436	756 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	ARID3A	Q99856	593 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	SLC2A11	Q9BYW1	496 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	RMND1	Q9NWS8	449 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	CACNA2D2	Q9NY47	1150 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	MARCH2	Q9P0N8	246 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	NUDT5	Q9UKK9	219 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	NFE2L3	Q9Y4A8	694 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	IGF2R	P11717	2491 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	MYH10	P35580	1976 aa		11.68	□□□□□ -0.54
CBWD1-222	ENST00000613508	ASCC3	Q8N3C0	2202 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	SLC16A3	O15427	465 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	EPB41	P11171	864 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	CORO1A	P31146	461 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	WAS	P42768	502 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	SLC8A3	P57103	927 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	YWHAG	P61981	247 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	GFPT1	Q06210	699 aa	Predicted RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	EFEMP1	Q12805	493 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	EIF4H	Q15056	248 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	ZNF394	Q53GI3	561 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	BHLHA9	Q7RTU4	235 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	SLC41A1	Q8IVJ1	513 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	RBBP8NL	Q8NC74	664 aa	Predicted RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	SPATA20	Q8TB22	786 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	PLD4	Q96BZ4	506 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	PIWIL1	Q96J94	861 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	GSDMA	Q96QA5	445 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	GTPBP4	Q9BZE4	634 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	MMRN2	Q9H8L6	949 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	PLK2	Q9NYY3	685 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	THAP10	Q9P2Z0	257 aa	Predicted RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	AGO1	Q9UL18	857 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	STRIP2	Q9ULQ0	834 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	STON1	Q9Y6Q2	735 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	DSP	P15924	2871 aa	Known RBP	11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	GON4L	Q3T8J9	2241 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	PCDH15	Q96QU1	1955 aa		11.67	□□□□□ -0.54
CBWD1-222	ENST00000613508	PI4KA	P42356	2102 aa		11.66	□□□□□ -0.54
CBWD1-222	ENST00000613508	ARHGAP33	O14559	1287 aa		11.66	□□□□□ -0.54
CBWD1-222	ENST00000613508	XPO1	O14980	1071 aa	Known RBP	11.66	□□□□□ -0.54
CBWD1-222	ENST00000613508	TIMM44	O43615	452 aa		11.66	□□□□□ -0.54
CBWD1-222	ENST00000613508	ZBED1	O96006	694 aa		11.66	□□□□□ -0.54
CBWD1-222	ENST00000613508	IGLV3-19	P01714	112 aa		11.66	□□□□□ -0.54
CBWD1-222	ENST00000613508	CFI	P05156	583 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms