RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 LIN28AQ9H9Z2 209 aaKnown RBP17.13■□□□□ 0.33
TSKU-205ENST00000612930 DNAJC28Q9NX36 388 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 COL20A1Q9P218 1284 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 ARHGAP28Q9P2N2 729 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 RIMS3Q9UJD0 308 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 LTBP1Q14766 1721 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 EXTL3O43909 919 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 APOEP02649 317 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 COX4I1P13073 169 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 CD1EP15812 388 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 NCF2P19878 526 aaPredicted RBP17.13■□□□□ 0.33
TSKU-205ENST00000612930 ACOT2P49753 483 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 CBLBQ13191 982 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 RARS2Q5T160 578 aaKnown RBP17.13■□□□□ 0.33
TSKU-205ENST00000612930 CAND1Q86VP6 1230 aaKnown RBP17.13■□□□□ 0.33
TSKU-205ENST00000612930 RNF168Q8IYW5 571 aaPredicted RBP17.13■□□□□ 0.33
TSKU-205ENST00000612930 LILRA2Q8N149 483 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 SAMD3Q8N6K7 520 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 JOSD2Q8TAC2 188 aa17.13■□□□□ 0.33
TSKU-205ENST00000612930 DHX33Q9H6R0 707 aaKnown RBP17.13■□□□□ 0.33
TSKU-205ENST00000612930 BBOX1O75936 387 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 KRT7P08729 469 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 ACAT1P24752 427 aaKnown RBP17.12■□□□□ 0.33
TSKU-205ENST00000612930 HSPA2P54652 639 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 TAP1Q03518 808 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 MTA1Q13330 715 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 TKFCQ3LXA3 575 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 DARS2Q6PI48 645 aaKnown RBP17.12■□□□□ 0.33
TSKU-205ENST00000612930 Q6ZNX1 250 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 ERI1Q8IV48 349 aaKnown RBP17.12■□□□□ 0.33
TSKU-205ENST00000612930 GFM2Q969S9 779 aaKnown RBP17.12■□□□□ 0.33
TSKU-205ENST00000612930 LRGUKQ96M69 825 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 CSRNP1Q96S65 589 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 SLC2A11Q9BYW1 496 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 PCDH18Q9HCL0 1135 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 TBCCD1Q9NVR7 557 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 ARHGAP26Q9UNA1 814 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 ZBTB14O43829 449 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 GABRB2P47870 512 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 MRPS22P82650 360 aaKnown RBP17.12■□□□□ 0.33
TSKU-205ENST00000612930 MPP3Q13368 585 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 UNC5AQ6ZN44 842 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 SMYD1Q8NB12 490 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 TMIGD2Q96BF3 282 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 RAB6BQ9NRW1 208 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 THEGQ9P2T0 379 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 RSL24D1Q9UHA3 163 aaKnown RBP17.12■□□□□ 0.33
TSKU-205ENST00000612930 PADI4Q9UM07 663 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 ZNF711Q9Y462 761 aa17.12■□□□□ 0.33
TSKU-205ENST00000612930 DCXO43602 365 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 TRPA1O75762 1119 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 ROR1Q01973 937 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 ACAP1Q15027 740 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 PDK1Q15118 436 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 FAXCQ5TGI0 409 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 UBR7Q8N806 425 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 COPS7BQ9H9Q2 264 aaPredicted RBP17.11■□□□□ 0.33
TSKU-205ENST00000612930 INIPQ9NRY2 104 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 TBC1D22BQ9NU19 505 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 TJP2Q9UDY2 1190 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 STK39Q9UEW8 545 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 TUBGCP4Q9UGJ1 667 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 PCSK1NQ9UHG2 260 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 ARID2Q68CP9 1835 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 SLX4Q8IY92 1834 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 SLC15A5A6NIM6 579 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 MYL4P12829 197 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 FUT4P22083 530 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 STT3AP46977 705 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 PHEXP78562 749 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 SLC44A4Q53GD3 710 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 POTEAQ6S8J7 498 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 GALNT4Q8N4A0 578 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 KCTD6Q8NC69 237 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 TMEM35BQ8NCS4 154 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 ACER1Q8TDN7 264 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 ANKEF1Q9NU02 776 aa17.11■□□□□ 0.33
TSKU-205ENST00000612930 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
TSKU-205ENST00000612930 DKC1O60832 514 aaKnown RBP eCLIP17.1■□□□□ 0.33
TSKU-205ENST00000612930 THRAP10827 490 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 ALOX15P16050 662 aaPredicted RBP17.1■□□□□ 0.33
TSKU-205ENST00000612930 OSBPP22059 807 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 TBXAS1P24557 533 aaPredicted RBP17.1■□□□□ 0.33
TSKU-205ENST00000612930 PCLAFQ15004 111 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 N4BP2L1Q5TBK1 243 aaPredicted RBP17.1■□□□□ 0.33
TSKU-205ENST00000612930 GPAT2Q6NUI2 795 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 POTEHQ6S545 545 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 ADCY4Q8NFM4 1077 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 ZDHHC15Q96MV8 337 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 RTKNQ9BST9 563 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 HOMER2Q9NSB8 354 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 FAM159BA6NKW6 160 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 STAM2O75886 525 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 LSM8O95777 96 aaKnown RBP17.1■□□□□ 0.33
TSKU-205ENST00000612930 CPA3P15088 417 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 MRPS9P82933 396 aaKnown RBP17.1■□□□□ 0.33
TSKU-205ENST00000612930 KLF10Q13118 480 aa17.1■□□□□ 0.33
TSKU-205ENST00000612930 MMRN1Q13201 1228 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms