RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PCGF5Q86SE9 256 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 MRPS31Q92665 395 aaKnown RBP11.22□□□□□ -0.61
FAM3A-221ENST00000612856 RILPQ96NA2 401 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 B3GNT5Q9BYG0 378 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 MYLK2Q9H1R3 596 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 SAYSD1Q9NPB0 183 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 SLC10A3P09131 477 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 MAPTP10636 758 aaKnown RBP11.22□□□□□ -0.61
FAM3A-221ENST00000612856 GATMP50440 423 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 C1QTNF8P60827 252 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 ZC3H12AQ5D1E8 599 aaKnown RBP11.22□□□□□ -0.61
FAM3A-221ENST00000612856 LRRC8DQ7L1W4 858 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 SAMD3Q8N6K7 520 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 RXFP2Q8WXD0 754 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 RUNDC3BQ96NL0 473 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 UBE2OQ9C0C9 1292 aaKnown RBP11.22□□□□□ -0.61
FAM3A-221ENST00000612856 SYNPO2Q9UMS6 1093 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 ANKRD31Q8N7Z5 1873 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 SSU72P8A0A1W2PR75 194 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 E5RJQ4 531 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 AMHP03971 560 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 MCF2P10911 925 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 ATP6V1C1P21283 382 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 FECHP22830 423 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 THOC5Q13769 683 aaKnown RBP11.22□□□□□ -0.61
FAM3A-221ENST00000612856 PRPSAP1Q14558 356 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 HYIQ5T013 277 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 PPP4R1Q8TF05 950 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 TBC1D10AQ9BXI6 508 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 WDCPQ9H6R7 721 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 SYNDIG1Q9H7V2 258 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 SAE1Q9UBE0 346 aaPredicted RBP11.22□□□□□ -0.61
FAM3A-221ENST00000612856 IP6K2Q9UHH9 426 aa11.22□□□□□ -0.61
FAM3A-221ENST00000612856 UBA6A0AVT1 1052 aaPredicted RBP11.21□□□□□ -0.61
FAM3A-221ENST00000612856 GOLGA8RI6L899 631 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 KIAA0391O15091 583 aaKnown RBP11.21□□□□□ -0.61
FAM3A-221ENST00000612856 GSTA2P09210 222 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 EIF3EP60228 445 aaKnown RBP11.21□□□□□ -0.61
FAM3A-221ENST00000612856 C15orf59Q2T9L4 293 aaPredicted RBP11.21□□□□□ -0.61
FAM3A-221ENST00000612856 GRAMD1BQ3KR37 738 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 SH3D19Q5HYK7 790 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 ZPBP2Q6X784 338 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 SDCCAG8Q86SQ7 713 aaPredicted RBP11.21□□□□□ -0.61
FAM3A-221ENST00000612856 AGGF1Q8N302 714 aaeCLIP11.21□□□□□ -0.61
FAM3A-221ENST00000612856 FAM172AQ8WUF8 416 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 CLIC5Q9NZA1 410 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 SLC12A4Q9UP95 1085 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 SLC8A2Q9UPR5 921 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 NR2E1Q9Y466 385 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 A0A1W2PQJ5 194 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 MDM4O15151 490 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 PLA2G6O60733 806 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 INHBAP08476 426 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 ATP6V1B1P15313 513 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 TMPRSS15P98073 1019 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 TFDP2Q14188 446 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 WDR49Q8IV35 697 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 FIBCD1Q8N539 461 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 CDC26Q8NHZ8 85 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 SPATA18Q8TC71 538 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 PYROXD1Q8WU10 500 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 CCDC124Q96CT7 223 aaKnown RBP11.21□□□□□ -0.61
FAM3A-221ENST00000612856 RAB6BQ9NRW1 208 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 CDY1Q9Y6F8 540 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 TLL2Q9Y6L7 1015 aa11.21□□□□□ -0.61
FAM3A-221ENST00000612856 SMIM28A0A1B0GU29 152 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 H0Y626 953 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 RGS20O76081 388 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 RBP3P10745 1247 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 TNFRSF8P28908 595 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 CLCNKBP51801 687 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 CDH18Q13634 790 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 CNGA2Q16280 664 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 KYAT1Q16773 422 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 C16orf59Q7L2K0 433 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 ARMCX6Q7L4S7 300 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 PDIK1LQ8N165 341 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 SPATA17Q96L03 361 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 ULBP1Q9BZM6 244 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 SLCO1B3Q9NPD5 702 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 PAIP2BQ9ULR5 123 aaKnown RBP11.21□□□□□ -0.62
FAM3A-221ENST00000612856 TRAF3IP3Q9Y228 551 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 MAST2Q6P0Q8 1798 aa11.21□□□□□ -0.62
FAM3A-221ENST00000612856 DCTN3O75935 186 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 KRT36O76013 467 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 HARS2P49590 506 aaKnown RBP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 CRYBB1P53674 252 aaPredicted RBP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 ATP13A4Q4VNC1 1196 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 ZNF410Q86VK4 478 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 GRK7Q8WTQ7 553 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 SEMA4DQ92854 862 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 IFT43Q96FT9 208 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 NMRK1Q9NWW6 199 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 LSM7Q9UK45 103 aaKnown RBP11.2□□□□□ -0.62
FAM3A-221ENST00000612856 EXOC1LA0A1B0GW35 172 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 MAGEA13PA6NCF6 341 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 KCNK1O00180 336 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 ASMTLO95671 621 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 KRT7P08729 469 aa11.2□□□□□ -0.62
FAM3A-221ENST00000612856 PNPLA4P41247 253 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms