RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	ZNF276	Q8N554	614 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CCDC185	Q8N715	623 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	PCMTD2	Q9NV79	361 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CHCHD3	Q9NX63	227 aa	Known RBP	13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	IL1RAPL1	Q9NZN1	696 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	ARMCX1	Q9P291	453 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	KANSL3	Q9P2N6	904 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	BRCA1	P38398	1863 aa	Known RBP	13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	E2F8	A0AVK6	867 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	TM9SF1	O15321	606 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	SMPD1	P17405	629 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	HOXA11	P31270	313 aa	Predicted RBP	13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	ARFIP2	P53365	341 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	SLC18A1	P54219	525 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	MDH1B	Q5I0G3	518 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	RGS9BP	Q6ZS82	235 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CLNK	Q7Z7G1	428 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	SLC26A11	Q86WA9	606 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	VPS52	Q8N1B4	723 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	SLC35F5	Q8WV83	523 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	PGLYRP2	Q96PD5	576 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	LGMN	Q99538	433 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CACNG4	Q9UBN1	327 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	FAM237B	A0A1B0GVD1	139 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CHAD	O15335	359 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	DYNC1LI2	O43237	492 aa	Predicted RBP	13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	RECQL4	O94761	1208 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CSH1	P0DML2	217 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CSH2	P0DML3	217 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	DES	P17661	470 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CPA2	P48052	419 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	CCDC15	Q0P6D6	951 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	PDK2	Q15119	407 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	RINL	Q6ZS11	566 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	ARL10	Q8N8L6	244 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	OR6J1	Q8NGC5	347 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	MAGEC3	Q8TD91	643 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	SLC2A14	Q8TDB8	520 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	APOPT1	Q96IL0	206 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	TMEM120A	Q9BXJ8	343 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	NOP53	Q9NZM5	478 aa	Known RBP	13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	AP4E1	Q9UPM8	1137 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	TTLL3	Q9Y4R7	772 aa		13.36	□□□□□ -0.27
SMTN-222	ENST00000612341	PDHX	O00330	501 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	ENTPD5	O75356	428 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	CAPN15	O75808	1086 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	SNAI1	O95863	264 aa	Predicted RBP	13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	GOT1	P17174	413 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	SERPINB4	P48594	390 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	SESN2	P58004	480 aa	Predicted RBP	13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	SNAPC2	Q13487	334 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	UNC5A	Q6ZN44	842 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	ZCCHC23	Q6ZST2	131 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	LINC01465	Q8N7H1	131 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	YIPF2	Q9BWQ6	316 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	VPS11	Q9H270	941 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	RNF39	Q9H2S5	420 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	POPDC2	Q9HBU9	364 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	PIN4	Q9Y237	131 aa	Known RBP	13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	PCDHGA4	Q9Y5G9	962 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	KRT37	O76014	449 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	F7	P08709	466 aa	Predicted RBP	13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	ACAT1	P24752	427 aa	Known RBP	13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	GRM5	P41594	1212 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	PITX1	P78337	314 aa	Predicted RBP	13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	TMPRSS15	P98073	1019 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	RASA2	Q15283	850 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	RFX8	Q6ZV50	586 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	FAM13C	Q8NE31	585 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	TTC8	Q8TAM2	541 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	ALKBH8	Q96BT7	664 aa	Known RBP	13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	TRIP11	Q15643	1979 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	ANK1	P16157	1881 aa		13.35	□□□□□ -0.27
SMTN-222	ENST00000612341	SLC15A5	A6NIM6	579 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	CLDN5	O00501	218 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	CREB3	O43889	395 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	MYL2	P10916	166 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	CCND1	P24385	295 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	SESN3	P58005	492 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	ZNF792	Q3KQV3	632 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	ANKRD20A3	Q5VUR7	823 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	HEATR6	Q6AI08	1181 aa	Known RBP	13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	CCNY	Q8ND76	341 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	BEST2	Q8NFU1	509 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	TBCB	Q99426	244 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	LRMDA	Q9H2I8	198 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	PLAC1	Q9HBJ0	212 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	CYLD	Q9NQC7	956 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	ARL8B	Q9NVJ2	186 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	KIAA1257	Q9ULG3	409 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	C2CD2L	O14523	706 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	SPTLC1	O15269	473 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	ADCY6	O43306	1168 aa		13.34	□□□□□ -0.27
SMTN-222	ENST00000612341	SNRPA	P09012	282 aa	Known RBP	13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms