RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 HDAC4P56524 1084 aa14.29□□□□□ -0.12
NOP56-219ENST00000612233 NCALDP61601 193 aa14.29□□□□□ -0.12
NOP56-219ENST00000612233 USP4Q13107 963 aa14.29□□□□□ -0.12
NOP56-219ENST00000612233 SOWAHAQ2M3V2 549 aa14.29□□□□□ -0.12
NOP56-219ENST00000612233 LGSNQ5TDP6 509 aa14.29□□□□□ -0.12
NOP56-219ENST00000612233 BEND5Q7L4P6 421 aa14.29□□□□□ -0.12
NOP56-219ENST00000612233 PARP9Q8IXQ6 854 aa14.29□□□□□ -0.12
NOP56-219ENST00000612233 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.29□□□□□ -0.12
NOP56-219ENST00000612233 UPF1Q92900 1129 aaKnown RBP eCLIP14.29□□□□□ -0.128e-7■■□□□ 14.2
NOP56-219ENST00000612233 PGAP3Q96FM1 320 aaPredicted RBP14.29□□□□□ -0.12
NOP56-219ENST00000612233 SNRNP25Q9BV90 132 aaKnown RBP14.29□□□□□ -0.12
NOP56-219ENST00000612233 TRIM6Q9C030 488 aaPredicted RBP14.29□□□□□ -0.12
NOP56-219ENST00000612233 NRDE2Q9H7Z3 1164 aa14.29□□□□□ -0.12
NOP56-219ENST00000612233 TRIM64CA6NLI5 447 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 FBXO21O94952 628 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 GNAT1P11488 350 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 MAGEA10P43363 369 aaPredicted RBP14.28□□□□□ -0.12
NOP56-219ENST00000612233 IGBP1P78318 339 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 SCAPQ12770 1279 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 WLSQ5T9L3 541 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 SPRYD7Q5W111 196 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 C3orf62Q6ZUJ4 267 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 PALM2Q8IXS6 379 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 PCDH19Q8TAB3 1148 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 FAM172AQ8WUF8 416 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 NTAN1Q96AB6 310 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ZMAT2Q96NC0 199 aaKnown RBP14.28□□□□□ -0.12
NOP56-219ENST00000612233 SLC2A13Q96QE2 648 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 NAT9Q9BTE0 207 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 PITPNM3Q9BZ71 974 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.28□□□□□ -0.12
NOP56-219ENST00000612233 DNAJC6O75061 913 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ALDH3A1P30838 453 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 TAF6P49848 677 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 BCAR1P56945 870 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ELF3P78545 371 aaPredicted RBP14.28□□□□□ -0.12
NOP56-219ENST00000612233 SNCBQ16143 134 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 SMTNL2Q2TAL5 461 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 MSS51Q4VC12 460 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 UBXN11Q5T124 520 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 TTC39BQ5VTQ0 682 aaPredicted RBP14.28□□□□□ -0.12
NOP56-219ENST00000612233 CATSPER4Q7RTX7 472 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 DPP9Q86TI2 863 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 SLC26A11Q86WA9 606 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 CCDC63Q8NA47 563 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ARMC2Q8NEN0 867 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 VPS37AQ8NEZ2 397 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 FBF1Q8TES7 1133 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 HSPH1Q92598 858 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 FAM118BQ9BPY3 351 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 POPDC2Q9HBU9 364 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ETNK2Q9NVF9 386 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 NME7Q9Y5B8 376 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.28□□□□□ -0.12
NOP56-219ENST00000612233 FAM170AA1A519 330 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 GABRDO14764 452 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ALDH1A2O94788 518 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ETV4P43268 484 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 GLUD2P49448 558 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ZNF200P98182 395 aaPredicted RBP14.28□□□□□ -0.12
NOP56-219ENST00000612233 MAP2K5Q13163 448 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 SPRED3Q2MJR0 410 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 DLK2Q6UY11 383 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 TMEM86AQ8N2M4 240 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 FAM71DQ8N9W8 422 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 LRRC8CQ8TDW0 803 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ACMSDQ8TDX5 336 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 SIKE1Q9BRV8 207 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 CHST12Q9NRB3 414 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 LNPEPQ9UIQ6 1025 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 TTLL3Q9Y4R7 772 aa14.28□□□□□ -0.12
NOP56-219ENST00000612233 ANKRD65E5RJM6 399 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 GABBR2O75899 941 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 IFNB1P01574 187 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 YBX3P16989 372 aaKnown RBP eCLIP14.27□□□□□ -0.122e-6■□□□□ 11
NOP56-219ENST00000612233 MATKP42679 507 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 IFNAR2P48551 515 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.12
NOP56-219ENST00000612233 ZNF33AQ06730 810 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 MFSD10Q14728 455 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 SLC25A52Q3SY17 297 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 KCNT1Q5JUK3 1230 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 KLHDC8BQ8IXV7 354 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 GIMAP7Q8NHV1 300 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 UBA3Q8TBC4 463 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 C10orf82Q8WW14 230 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 C18orf25Q96B23 403 aaPredicted RBP14.27□□□□□ -0.12
NOP56-219ENST00000612233 CALN1Q9BXU9 219 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 PHTF1Q9UMS5 762 aa14.27□□□□□ -0.12
NOP56-219ENST00000612233 FAM159BA6NKW6 160 aa14.27□□□□□ -0.13
NOP56-219ENST00000612233 KPNA7A9QM74 516 aa14.27□□□□□ -0.13
NOP56-219ENST00000612233 ZNF865P0CJ78 1059 aaPredicted RBP14.27□□□□□ -0.13
NOP56-219ENST00000612233 NQO1P15559 274 aaKnown RBP14.27□□□□□ -0.13
NOP56-219ENST00000612233 PSEN2P49810 448 aa14.27□□□□□ -0.13
NOP56-219ENST00000612233 PAFAH1B3Q15102 231 aaKnown RBP14.27□□□□□ -0.13
NOP56-219ENST00000612233 LLGL1Q15334 1064 aa14.27□□□□□ -0.13
NOP56-219ENST00000612233 RAB3IPQ96QF0 476 aaPredicted RBP14.27□□□□□ -0.13
NOP56-219ENST00000612233 SLC7A5P2Q9GIP4 190 aa14.27□□□□□ -0.13
NOP56-219ENST00000612233 LRMDAQ9H2I8 198 aa14.27□□□□□ -0.13
NOP56-219ENST00000612233 TLE6Q9H808 572 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms