RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 NDST1P52848 882 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 SLC18A2Q05940 514 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 HIC1Q14526 733 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 NOMO1Q15155 1222 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 ATG14Q6ZNE5 492 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 ACOT1Q86TX2 421 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 SULF1Q8IWU6 871 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 ADGRF2Q8IZF7 708 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 ZNF398Q8TD17 642 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 NMD3Q96D46 503 aaKnown RBP21.11■□□□□ 0.97
SSBP3-216ENST00000610401 TEPSINQ96N21 525 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 TEX13BQ9BXU2 312 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 CXCL16Q9H2A7 254 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 NRBP2Q9NSY0 501 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 CNTN3Q9P232 1028 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 TSPAN16Q9UKR8 245 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 MAGEA13PA6NCF6 341 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 A6NJR5 290 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 FESP07332 822 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 TCN1P20061 433 aaPredicted RBP21.11■□□□□ 0.97
SSBP3-216ENST00000610401 GPD1P21695 349 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 MLH1P40692 756 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 FAM83AQ86UY5 434 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 ZBTB8OSQ8IWT0 167 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 DEFB107AQ8IZN7 70 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 ZNF280CQ8ND82 737 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 RNF157Q96PX1 679 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 ECSITQ9BQ95 431 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 COL11A2P13942 1736 aaPredicted RBP21.11■□□□□ 0.97
SSBP3-216ENST00000610401 KRT38O76015 456 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 APOEP02649 317 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 AQP4P55087 323 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 OCRLQ01968 901 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 SFT2D3Q587I9 215 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 CWF19L1Q69YN2 538 aaKnown RBP21.11■□□□□ 0.97
SSBP3-216ENST00000610401 CCNYQ8ND76 341 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 CMASQ8NFW8 434 aaPredicted RBP21.11■□□□□ 0.97
SSBP3-216ENST00000610401 GCNAQ96QF7 691 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 WDR35Q9P2L0 1181 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 MAFBQ9Y5Q3 323 aaPredicted RBP21.11■□□□□ 0.97
SSBP3-216ENST00000610401 LY75O60449 1722 aa21.11■□□□□ 0.97
SSBP3-216ENST00000610401 TPP1O14773 563 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 APOL1O14791 398 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 PLSCR1O15162 318 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 ERVK-10P10266 1014 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 C10orf107Q8IVU9 208 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 PHTF2Q8N3S3 785 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 RDM1Q8NG50 284 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 RNF217Q8TC41 542 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 MARK4Q96L34 752 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 GPR25O00155 361 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 NPTXRO95502 500 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 PDGFRBP09619 1106 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 RAB27AP51159 221 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 TAP1Q03518 808 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 ITGA9Q13797 1035 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 GLRA4Q5JXX5 417 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 LGSNQ5TDP6 509 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 IL31Q6EBC2 164 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 PQLC3Q8N755 202 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 TMEM176AQ96HP8 235 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 SNRNP25Q9BV90 132 aaKnown RBP21.1■□□□□ 0.97
SSBP3-216ENST00000610401 CLIC5Q9NZA1 410 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 LAMA3Q16787 3333 aa21.1■□□□□ 0.97
SSBP3-216ENST00000610401 AHCYL1O43865 530 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 TM7SF2O76062 418 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 ATG7O95352 703 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 STIP1P31948 543 aaKnown RBP21.09■□□□□ 0.97
SSBP3-216ENST00000610401 DLG1Q12959 904 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 CHSY1Q86X52 802 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 UBR7Q8N806 425 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 ZNF778Q96MU6 729 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 APOL2Q9BQE5 337 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 TUBB6Q9BUF5 446 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 KCNK4Q9NYG8 393 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 CPSF3Q9UKF6 684 aaKnown RBP21.09■□□□□ 0.97
SSBP3-216ENST00000610401 PLA2G4CQ9UP65 541 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 APOBEC2Q9Y235 224 aaKnown RBP21.09■□□□□ 0.97
SSBP3-216ENST00000610401 KIAA1217Q5T5P2 1943 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 CAPN14A8MX76 684 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 MED7O43513 233 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 LCP1P13796 627 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 CYP3A5P20815 502 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 SERPINB5P36952 375 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 CCR10P46092 362 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 RABGGTBP53611 331 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 BTKQ06187 659 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 TMEM62Q0P6H9 643 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 SLC10A2Q12908 348 aaPredicted RBP21.09■□□□□ 0.97
SSBP3-216ENST00000610401 PMF1Q6P1K2 205 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 OCEL1Q9H607 264 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 ZNF212Q9UDV6 495 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 AIM2O14862 343 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 ADCY6O43306 1168 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 ATP6V1B1P15313 513 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 TP53INP2Q8IXH6 220 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 CDHR1Q96JP9 859 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 CAB39LQ9H9S4 337 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 ADAMTS6Q9UKP5 1117 aa21.09■□□□□ 0.97
SSBP3-216ENST00000610401 CCNFP41002 786 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms