RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 UBXN11Q5T124 520 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 ERAP2Q6P179 960 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 TPRG1Q6ZUI0 275 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 MICALCLQ6ZW33 695 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 C16orf59Q7L2K0 433 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 FAM131BQ86XD5 332 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 SCUBE3Q8IX30 993 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 TCEAL8Q8IYN2 117 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 WFIKKN2Q8TEU8 576 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 OTUB2Q96DC9 234 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 TBC1D31Q96DN5 1066 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 PPP1R10Q96QC0 940 aaKnown RBP5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 IRX2Q9BZI1 471 aaPredicted RBP5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 HEPACAM2A8MVW5 462 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 IGSF6O95976 241 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 GLI1P08151 1106 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 DGKGP49619 791 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 ARL4DP49703 201 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 FXR1P51114 621 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 RENBPP51606 427 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 ZNF135P52742 658 aaPredicted RBP5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 THOP1P52888 689 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 NRLP54845 237 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 SLC6A3Q01959 620 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 SEPT6Q14141 434 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 DUSP6Q16828 381 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 FBXO43Q4G163 708 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 TXNDC8Q6A555 127 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 ACAD10Q6JQN1 1059 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 FBXL19Q6PCT2 694 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 B3GNT9Q6UX72 402 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 GLIS3Q8NEA6 775 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 ATL2Q8NHH9 583 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 FEZF2Q8TBJ5 459 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 ATXN2LQ8WWM7 1075 aaKnown RBP5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 OR8D1Q8WZ84 308 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 ATOH1Q92858 354 aaPredicted RBP5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 C8orf48Q96LL4 319 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 HOMER3Q9NSC5 361 aa5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 YBX2Q9Y2T7 364 aaKnown RBP5.35□□□□□ -1.55
SCARNA15-201ENST00000607520 FAM237AA0A1B0GTK4 181 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 A0A1W2PQH9 124 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 MIF4GDA9UHW6 222 aaKnown RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 KCNK3O14649 394 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 MTSS1O43312 755 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 DCXO43602 365 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 KLRC4O43908 158 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 SOAT2O75908 522 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 CST3P01034 146 aaPredicted RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 C4BPAP04003 597 aaKnown RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 TUBP50607 506 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 DLG4P78352 724 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 GJB7Q6PEY0 223 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 RNF19BQ6ZMZ0 732 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 C15orf39Q6ZRI6 1047 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 UBALD2Q8IYN6 164 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 HDDC3Q8N4P3 179 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 RXFP2Q8WXD0 754 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 SCG3Q8WXD2 468 aaKnown RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 IRGQQ8WZA9 623 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 DCUN1D1Q96GG9 259 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 PPP1R2P1Q96PQ5 205 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 ERGIC2Q96RQ1 377 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 PRRX2Q99811 253 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 JRKLQ9Y4A0 524 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 SDK1Q7Z5N4 2213 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 ZSCAN5CA6NGD5 496 aaPredicted RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 LRRC72A6NJI9 287 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 MEIS3P2A8K0S8 358 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 SGK1O00141 431 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 EBAG9O00559 213 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 APOL1O14791 398 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 ATP2C2O75185 946 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 PMLP29590 882 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 CORO1AP31146 461 aaKnown RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 MAN1A1P33908 653 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 SLC1A1P43005 524 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 DHPSP49366 369 aaPredicted RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 AARSP49588 968 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 EPHB4P54760 987 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 AP1B1Q10567 949 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 INAVAQ3KP66 663 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 C2orf27AQ580R0 203 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 TMEM31Q5JXX7 168 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 DGKKQ5KSL6 1271 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 PPP1R26Q5T8A7 1209 aaPredicted RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 RNF187Q5TA31 235 aaPredicted RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 FOXR2Q6PJQ5 311 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 CDKL3Q8IVW4 592 aaPredicted RBP5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 REXO1L1PQ8IX06 675 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 ARFGAP2Q8N6H7 521 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 C12orf29Q8N999 325 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 FAM172AQ8WUF8 416 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 DYDC1Q8WWB3 177 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 PNKPQ96T60 521 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 EPC1Q9H2F5 836 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 KCTD10Q9H3F6 313 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 L2HGDHQ9H9P8 463 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 SORCS3Q9UPU3 1222 aa5.34□□□□□ -1.55
SCARNA15-201ENST00000607520 MRFAP1Q9Y605 127 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms