RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 LZTFL1Q9NQ48 299 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 GKN1Q9NS71 199 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 OLA1Q9NTK5 396 aaKnown RBP8.02□□□□□ -1.13
MSH6-211ENST00000606499 PIGVQ9NUD9 493 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 DDIT4Q9NX09 232 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 MARCH2Q9P0N8 246 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 COX16Q9P0S2 106 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 UVRAGQ9P2Y5 699 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 SFMBT1Q9UHJ3 866 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 CCL26Q9Y258 94 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 CPQQ9Y646 472 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 DOCK8Q8NF50 2099 aa8.02□□□□□ -1.13
MSH6-211ENST00000606499 BDP1A6H8Y1 2624 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 A0A0A6YYK5 440 aaPredicted RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 SLC12A8A0AV02 714 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 MACROD2A1Z1Q3 448 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 USP27XA6NNY8 438 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 TMEM110-MUSTN1A8MSY1 372 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 M0QYT0 321 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 DPYSL4O14531 572 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 SCAMP3O14828 347 aaKnown RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 IRAK2O43187 625 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 BUB1O43683 1085 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 MTA2O94776 668 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 TRUB2O95900 331 aaKnown RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 IGLV3-25P01717 112 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 HMBSP08397 361 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 MBL2P11226 248 aaPredicted RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 FCARP24071 287 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 PSMA2P25787 234 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 DDX6P26196 483 aaKnown RBP eCLIP8.01□□□□□ -1.13
MSH6-211ENST00000606499 SDC4P31431 198 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 GBP2P32456 591 aaPredicted RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 ATP5C1P36542 298 aaKnown RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 AVPR1AP37288 418 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 ARHGAP25P42331 645 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 PTPN9P43378 593 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 NOP2P46087 812 aaKnown RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 KCNQ1P51787 676 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 ZNF143P52747 638 aaPredicted RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 KIF5AQ12840 1032 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 SLC25A52Q3SY17 297 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 FAM78AQ5JUQ0 283 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 ARCQ7LC44 396 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 TADA2BQ86TJ2 420 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 CMTM8Q8IZV2 173 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 C17orf53Q8N3J3 647 aaPredicted RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 ZNF276Q8N554 614 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 RIN3Q8TB24 985 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 FAM172AQ8WUF8 416 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 NT5C3BQ969T7 300 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 WBP2Q969T9 261 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 RSPRY1Q96DX4 576 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 SERPINB11Q96P15 392 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 CDK5RAP1Q96SZ6 601 aaKnown RBP8.01□□□□□ -1.13
MSH6-211ENST00000606499 CNPY3Q9BT09 278 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 GOLPH3Q9H4A6 298 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 THEGQ9P2T0 379 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 DNMT3LQ9UJW3 386 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 CDH7Q9ULB5 785 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 STAP1Q9ULZ2 295 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 PAXBP1Q9Y5B6 917 aa8.01□□□□□ -1.13
MSH6-211ENST00000606499 COL4A2P08572 1712 aa8□□□□□ -1.13
MSH6-211ENST00000606499 BTNL10A8MVZ5 291 aa8□□□□□ -1.13
MSH6-211ENST00000606499 C2CD4DB7Z1M9 353 aa8□□□□□ -1.13
MSH6-211ENST00000606499 BUB1BO60566 1050 aaPredicted RBP8□□□□□ -1.13
MSH6-211ENST00000606499 LRCH4O75427 683 aa8□□□□□ -1.13
MSH6-211ENST00000606499 STC2O76061 302 aa8□□□□□ -1.13
MSH6-211ENST00000606499 MOCS3O95396 460 aa8□□□□□ -1.13
MSH6-211ENST00000606499 IGLV3-27P01718 113 aa8□□□□□ -1.13
MSH6-211ENST00000606499 LAMP2P13473 410 aa8□□□□□ -1.13
MSH6-211ENST00000606499 IL9P15248 144 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TCF4P15884 667 aa8□□□□□ -1.13
MSH6-211ENST00000606499 RDXP35241 583 aaKnown RBP8□□□□□ -1.13
MSH6-211ENST00000606499 VIPR2P41587 438 aa8□□□□□ -1.13
MSH6-211ENST00000606499 HADHBP55084 474 aaKnown RBP8□□□□□ -1.13
MSH6-211ENST00000606499 HDAC4P56524 1084 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TBX4P57082 545 aa8□□□□□ -1.13
MSH6-211ENST00000606499 SLC7A9P82251 487 aa8□□□□□ -1.13
MSH6-211ENST00000606499 DEUP1Q05D60 604 aa8□□□□□ -1.13
MSH6-211ENST00000606499 USP4Q13107 963 aa8□□□□□ -1.13
MSH6-211ENST00000606499 MESDQ14696 234 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TCEAL1Q15170 157 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TRIP4Q15650 581 aaPredicted RBP8□□□□□ -1.13
MSH6-211ENST00000606499 SMAD2Q15796 467 aaKnown RBP8□□□□□ -1.13
MSH6-211ENST00000606499 KLHDC10Q6PID8 442 aa8□□□□□ -1.13
MSH6-211ENST00000606499 BNIPLQ7Z465 357 aa8□□□□□ -1.13
MSH6-211ENST00000606499 FAM131BQ86XD5 332 aa8□□□□□ -1.13
MSH6-211ENST00000606499 ARID3BQ8IVW6 561 aaPredicted RBP8□□□□□ -1.13
MSH6-211ENST00000606499 REXO1L1PQ8IX06 675 aa8□□□□□ -1.13
MSH6-211ENST00000606499 TXLNBQ8N3L3 684 aa8□□□□□ -1.13
MSH6-211ENST00000606499 ARFGAP1Q8N6T3 406 aa8□□□□□ -1.13
MSH6-211ENST00000606499 SH3RF2Q8TEC5 729 aa8□□□□□ -1.13
MSH6-211ENST00000606499 FNIP1Q8TF40 1166 aa8□□□□□ -1.13
MSH6-211ENST00000606499 CENPIQ92674 756 aaPredicted RBP8□□□□□ -1.13
MSH6-211ENST00000606499 SMARCD2Q92925 531 aa8□□□□□ -1.13
MSH6-211ENST00000606499 USP13Q92995 863 aaPredicted RBP8□□□□□ -1.13
MSH6-211ENST00000606499 TRIM44Q96DX7 344 aaPredicted RBP8□□□□□ -1.13
MSH6-211ENST00000606499 PGAP3Q96FM1 320 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms