RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 CHPF2Q9P2E5 772 aa5.84□□□□□ -1.47
SH3D19-213ENST00000604922 PI4KBQ9UBF8 816 aa5.84□□□□□ -1.47
SH3D19-213ENST00000604922 SCAF8Q9UPN6 1271 aaKnown RBP5.84□□□□□ -1.47
SH3D19-213ENST00000604922 CARMIL1Q5VZK9 1371 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 KIF3BO15066 747 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 TMEM225BP0DP42 221 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 YY1P25490 414 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 MCM5P33992 734 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 PLCD1P51178 756 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 GHRHRQ02643 423 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 KLF9Q13886 244 aaPredicted RBP5.83□□□□□ -1.48
SH3D19-213ENST00000604922 ETFDHQ16134 617 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 CC2D1BQ5T0F9 858 aaKnown RBP5.83□□□□□ -1.48
SH3D19-213ENST00000604922 PXDC1Q5TGL8 231 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 KRT28Q7Z3Y7 464 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 P3H2Q8IVL5 708 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 CCAR1Q8IX12 1150 aaKnown RBP5.83□□□□□ -1.48
SH3D19-213ENST00000604922 CCDC33Q8N5R6 958 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 CCDC150Q8NCX0 1101 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 MBD3L2Q8NHZ7 208 aaPredicted RBP5.83□□□□□ -1.48
SH3D19-213ENST00000604922 OSR1Q8TAX0 266 aaPredicted RBP5.83□□□□□ -1.48
SH3D19-213ENST00000604922 CUL5Q93034 780 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 NAF1Q96HR8 494 aaKnown RBP5.83□□□□□ -1.48
SH3D19-213ENST00000604922 C8orf48Q96LL4 319 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 CINPQ9BW66 212 aaPredicted RBP5.83□□□□□ -1.48
SH3D19-213ENST00000604922 KLHL13Q9P2N7 655 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 VPS51Q9UID3 782 aa5.83□□□□□ -1.48
SH3D19-213ENST00000604922 TRAPPC8Q9Y2L5 1435 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 POM121BA6NF01 834 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 AREL1O15033 823 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 CCNT2O60583 730 aaKnown RBP5.82□□□□□ -1.48
SH3D19-213ENST00000604922 BCAR3O75815 825 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 PARNO95453 639 aaKnown RBP5.82□□□□□ -1.48
SH3D19-213ENST00000604922 PIK3CBP42338 1070 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 COPAP53621 1224 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 ZNF543Q08ER8 600 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 IFIT5Q13325 482 aaKnown RBP5.82□□□□□ -1.48
SH3D19-213ENST00000604922 MFSD13AQ14CX5 517 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 COBLL1Q53SF7 1204 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 MEX3CQ5U5Q3 659 aaKnown RBP5.82□□□□□ -1.48
SH3D19-213ENST00000604922 RRAGBQ5VZM2 374 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 C11orf87Q6NUJ2 197 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 RANBP10Q6VN20 620 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 BEND5Q7L4P6 421 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 CCDC136Q96JN2 1154 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 SELENOOQ9BVL4 669 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 ZBTB26Q9HCK0 441 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 ASAP1Q9ULH1 1129 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 FAM50BQ9Y247 325 aa5.82□□□□□ -1.48
SH3D19-213ENST00000604922 COL15A1P39059 1388 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 HECW1Q76N89 1606 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 CFAP74Q9C0B2 1584 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 CPS1P31327 1500 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 CLIC1O00299 241 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 KPNA5O15131 536 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 TP73O15350 636 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 COQ9O75208 318 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 IDEP14735 1019 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 ATP5F1P24539 256 aaPredicted RBP5.81□□□□□ -1.48
SH3D19-213ENST00000604922 ATICP31939 592 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 DEUP1Q05D60 604 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 CCDC15Q0P6D6 951 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 HLTFQ14527 1009 aaKnown RBP eCLIP5.81□□□□□ -1.48
SH3D19-213ENST00000604922 SAFBQ15424 915 aaKnown RBP eCLIP5.81□□□□□ -1.48
SH3D19-213ENST00000604922 ANO7Q6IWH7 933 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 ZNF398Q8TD17 642 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 PNISRQ8TF01 805 aaKnown RBP5.81□□□□□ -1.48
SH3D19-213ENST00000604922 ABHD5Q8WTS1 349 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 EDC3Q96F86 508 aaKnown RBP5.81□□□□□ -1.48
SH3D19-213ENST00000604922 LRRC46Q96FV0 321 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 HIC2Q96JB3 615 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 SARGQ9BW04 601 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 MAGEB5Q9BZ81 275 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 VPS16Q9H269 839 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 TMOD4Q9NZQ9 345 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 ATP10AO60312 1499 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 ATP10BO94823 1461 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 PTPRKQ15262 1439 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 C9orf84Q5VXU9 1444 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 KIF27Q86VH2 1401 aa5.81□□□□□ -1.48
SH3D19-213ENST00000604922 ZNF521Q96K83 1311 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 PLA2R1Q13018 1463 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 TCOF1Q13428 1488 aaKnown RBP5.8□□□□□ -1.48
SH3D19-213ENST00000604922 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.8□□□□□ -1.48
SH3D19-213ENST00000604922 CLCA1A8K7I4 914 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 PPEF2O14830 753 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 MOSPD3O75425 235 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 WDR47O94967 919 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 MYL4P12829 197 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 SFPQP23246 707 aaKnown RBP eCLIP5.8□□□□□ -1.48
SH3D19-213ENST00000604922 DGKQP52824 942 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 PFKFB3Q16875 520 aaPredicted RBP5.8□□□□□ -1.48
SH3D19-213ENST00000604922 AWAT1Q58HT5 328 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 USP17L6PQ6QN14 398 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 LIX1LQ8IVB5 337 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 FCRL4Q96PJ5 515 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 FZD4Q9ULV1 537 aa5.8□□□□□ -1.48
SH3D19-213ENST00000604922 SUPT6HQ7KZ85 1726 aaKnown RBP5.79□□□□□ -1.48
SH3D19-213ENST00000604922 E5RJQ4 531 aa5.79□□□□□ -1.48
SH3D19-213ENST00000604922 FCHO1O14526 889 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms