RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ZBTB14O43829 449 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 VNN1O95497 513 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 FGF3P11487 239 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-212ENST00000604599 CRHR1P34998 444 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ACOT2P49753 483 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 NUDT2P50583 147 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 JAG1P78504 1218 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 PHEXP78562 749 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 Q6ZNX1 250 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 TSPAN14Q8NG11 270 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 HSPH1Q92598 858 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 MXRA8Q9BRK3 442 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 OXCT2Q9BYC2 517 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-212ENST00000604599 POPDC2Q9HBU9 364 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 TBCCD1Q9NVR7 557 aa12.85□□□□□ -0.35
CDCA3-212ENST00000604599 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
CDCA3-212ENST00000604599 CROCCQ5TZA2 2017 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 CNTNAP2Q9UHC6 1331 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 TCRBV5S1A1TA0A578 114 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 SH3PXD2BA1X283 911 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 FOXD2O60548 495 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 LRCH4O75427 683 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 GSRP00390 522 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 CALB1P05937 261 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 PORP16435 677 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 KDELR1P24390 212 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 ARRB2P32121 409 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 RFC1P35251 1148 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 STAT2P52630 851 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 SLC25A11Q02978 314 aaKnown RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 BTG3Q14201 252 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 SMAD1Q15797 465 aaKnown RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 NRF1Q16656 503 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 APOBEC3HQ6NTF7 200 aaKnown RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 TMEM179Q6ZVK1 233 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 ARFGAP1Q8N6T3 406 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 PPP4R1Q8TF05 950 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 TUT1Q9H6E5 874 aaKnown RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 NUB1Q9Y5A7 615 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 GH2P01242 217 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 COL6A2P12110 1019 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 XRCC1P18887 633 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 THOP1P52888 689 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 ROR1Q01973 937 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-212ENST00000604599 IL31RAQ8NI17 732 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 LRRN4Q8WUT4 740 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 TEKT1Q969V4 418 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 PKP2Q99959 881 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 DCUN1D5Q9BTE7 237 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 EHMT1Q9H9B1 1298 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 PNPLA8Q9NP80 782 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 TBC1D22BQ9NU19 505 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 SLC17A6Q9P2U8 582 aa12.84□□□□□ -0.35
CDCA3-212ENST00000604599 ADCY6O43306 1168 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 MAP3K6O95382 1288 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 APRTP07741 180 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 PSMC3P17980 439 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 SERPINB5P36952 375 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 PKNOX1P55347 436 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 MCCD1P59942 119 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-212ENST00000604599 PSMD6Q15008 389 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 USP41Q3LFD5 358 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 ITPRIPL1Q6GPH6 555 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 PACS1Q6VY07 963 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 KIAA0319LQ8IZA0 1049 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 EMC1Q8N766 993 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 KCTD6Q8NC69 237 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 JOSD2Q8TAC2 188 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 AGR3Q8TD06 166 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 NLRP7Q8WX94 980 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 MKS1Q9NXB0 559 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 TJP2Q9UDY2 1190 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 STK39Q9UEW8 545 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 E2F8A0AVK6 867 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 APOC4-APOC2K7ER74 178 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 DHX15O43143 795 aaKnown RBP12.83□□□□□ -0.36
CDCA3-212ENST00000604599 STAM2O75886 525 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 APOEP02649 317 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 APOC2P02655 101 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 OSBPP22059 807 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 PRKCHP24723 683 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 GMPRP36959 345 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 CDK9P50750 372 aaKnown RBP12.83□□□□□ -0.36
CDCA3-212ENST00000604599 OXCT1P55809 520 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 GSTM4Q03013 218 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 UNC5AQ6ZN44 842 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 TICAM1Q8IUC6 712 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 GSDMBQ8TAX9 411 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
CDCA3-212ENST00000604599 USP13Q92995 863 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-212ENST00000604599 SORT1Q99523 831 aa12.83□□□□□ -0.36
CDCA3-212ENST00000604599 STN1Q9H668 368 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms