RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 HAPLN3Q96S86 360 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ST6GALNAC4Q9H4F1 302 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 SMARCAD1Q9H4L7 1026 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 MVB12BQ9H7P6 319 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 ARMT1Q9H993 441 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TIMMDC1Q9NPL8 285 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 EIF2B3Q9NR50 452 aaKnown RBP5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TAS2R3Q9NYW6 316 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 BAIAP2L1Q9UHR4 511 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 COMMD3-BMI1R4GMX3 469 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 TOPAZ1Q8N9V7 1692 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 QRICH2Q9H0J4 1663 aa5.22□□□□□ -1.57
SPTBN1-206ENST00000602898 PXDNLA1KZ92 1463 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 CPSF1Q10570 1443 aaKnown RBP5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 NUP155O75694 1391 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 CCDC78A2IDD5 438 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 GSAPA4D1B5 854 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 CDC14CA4D256 554 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 HMX3A6NHT5 357 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 GOLGA8KD6RF30 607 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 EFCAB14O75071 495 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 TACC1O75410 805 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 TUSC2O75896 110 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF202O95125 648 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 APOEP02649 317 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 GNAI3P08754 354 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 HLA-DPA1P20036 260 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 RPA1P27694 616 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 CAMLGP49069 296 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 SCNN1GP51170 649 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 ZNF157P51786 506 aaPredicted RBP5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 ARL4CP56559 192 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 CETN1Q12798 172 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 LSAMPQ13449 338 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 PTK2BQ14289 1009 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 UAP1L1Q3KQV9 507 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 ANO7Q6IWH7 933 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 DUS1LQ6P1R4 473 aaKnown RBP5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 ARMCX2Q7L311 632 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 PTF1AQ7RTS3 328 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 RTN4RL1Q86UN2 441 aaPredicted RBP5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 PHC2Q8IXK0 858 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 SPARTQ8N0X7 666 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 OR1N1Q8NGS0 311 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 OR6P1Q8NGX9 317 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM216AQ8WUB2 273 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 KLHL6Q8WZ60 621 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 PTPRN2Q92932 1015 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 MUL1Q969V5 352 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 LENG1Q96BZ8 264 aaPredicted RBP5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 EDC3Q96F86 508 aaKnown RBP5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 NDEL1Q9GZM8 345 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 EPN3Q9H201 632 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 NRBP2Q9NSY0 501 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 MED16Q9Y2X0 877 aa5.21□□□□□ -1.57
SPTBN1-206ENST00000602898 SBNO1A3KN83 1393 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF536O15090 1300 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 AGAP14A8MT82 685 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 PRR5-ARHGAP8B1AHC4 643 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 CDK2AP1O14519 115 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 HNRNPRO43390 633 aaKnown RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 RANBP6O60518 1105 aaKnown RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 OPN1MWP04001 364 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 EIF2S1P05198 315 aaKnown RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 OPN1MW2P0DN77 364 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 OPN1MW3P0DN78 364 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 ARF4P18085 180 aaPredicted RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 TNFRSF8P28908 595 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 GCH1P30793 250 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 PPP1R2P41236 205 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 CCR3P51677 355 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 DSTNP60981 165 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 SNAPC2Q13487 334 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 TRIM25Q14258 630 aaKnown RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 GNA13Q14344 377 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 ADRM1Q16186 407 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 SGO1Q5FBB7 561 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 FBXO48Q5FWF7 155 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 ANKRD20A2Q5SQ80 823 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 ANKRD20A1Q5TYW2 823 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 ANKRD20A3Q5VUR7 823 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 PPP1R2P3Q6NXS1 205 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 OTOAQ7RTW8 1153 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 TXNRD3Q86VQ6 643 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 SCUBE1Q8IWY4 988 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 TUSC5Q8IXB3 177 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 THNSL1Q8IYQ7 743 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 PCSK9Q8NBP7 692 aaKnown RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 GPR150Q8NGU9 434 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 CSGALNACT1Q8TDX6 532 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 STYXQ8WUJ0 223 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 SIPA1Q96FS4 1042 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 RPRD1AQ96P16 312 aaPredicted RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 CCDC28BQ9BUN5 200 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 INTS2Q9H0H0 1204 aaKnown RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 SERHL2Q9H4I8 314 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 PALMDQ9NP74 551 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 SOHLH2Q9NX45 425 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 ASH2LQ9UBL3 628 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 APEX2Q9UBZ4 518 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms