RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 DNMT3LQ9UJW3 386 aa21.34■■□□□ 1.01
PNKP-215ENST00000600910 CAPN6Q9Y6Q1 641 aa21.34■■□□□ 1.01
PNKP-215ENST00000600910 C5orf42Q9H799 3197 aa21.34■■□□□ 1.01
PNKP-215ENST00000600910 SYNJ2BP-COX16A0A087WUM0 186 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 GOLGA6L9A6NEM1 432 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 HDCP19113 662 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 DDX6P26196 483 aaKnown RBP eCLIP21.33■■□□□ 1.01
PNKP-215ENST00000600910 PIGHQ14442 188 aaPredicted RBP21.33■■□□□ 1.01
PNKP-215ENST00000600910 GET4Q7L5D6 327 aaPredicted RBP21.33■■□□□ 1.01
PNKP-215ENST00000600910 MIB1Q86YT6 1006 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 FAM172AQ8WUF8 416 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 SLITRK6Q9H5Y7 841 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 DDIT4Q9NX09 232 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 MARCH2Q9P0N8 246 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 COX16Q9P0S2 106 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 LCMT1Q9UIC8 334 aa21.33■■□□□ 1.01
PNKP-215ENST00000600910 TRAV19A0A0A6YYK7 116 aa21.33■■□□□ 1
PNKP-215ENST00000600910 MSI1O43347 362 aaKnown RBP21.33■■□□□ 1
PNKP-215ENST00000600910 PROSCO94903 275 aa21.33■■□□□ 1
PNKP-215ENST00000600910 OLFM2O95897 454 aa21.33■■□□□ 1
PNKP-215ENST00000600910 IGLV3-25P01717 112 aa21.33■■□□□ 1
PNKP-215ENST00000600910 DESP17661 470 aa21.33■■□□□ 1
PNKP-215ENST00000600910 MTHFRP42898 656 aa21.33■■□□□ 1
PNKP-215ENST00000600910 NME3Q13232 169 aa21.33■■□□□ 1
PNKP-215ENST00000600910 RAB6CQ53S08 254 aa21.33■■□□□ 1
PNKP-215ENST00000600910 DAB2IPQ5VWQ8 1189 aa21.33■■□□□ 1
PNKP-215ENST00000600910 BNIPLQ7Z465 357 aa21.33■■□□□ 1
PNKP-215ENST00000600910 NIPA2Q8N8Q9 360 aa21.33■■□□□ 1
PNKP-215ENST00000600910 CENPIQ92674 756 aaPredicted RBP21.33■■□□□ 1
PNKP-215ENST00000600910 IRX2Q9BZI1 471 aaPredicted RBP21.33■■□□□ 1
PNKP-215ENST00000600910 RAB6CQ9H0N0 254 aa21.33■■□□□ 1
PNKP-215ENST00000600910 GOLPH3Q9H4A6 298 aa21.33■■□□□ 1
PNKP-215ENST00000600910 TASP1Q9H6P5 420 aa21.33■■□□□ 1
PNKP-215ENST00000600910 GRID2IPA4D2P6 1211 aa21.32■■□□□ 1
PNKP-215ENST00000600910 CKMP06732 381 aa21.32■■□□□ 1
PNKP-215ENST00000600910 PFKLP17858 780 aa21.32■■□□□ 1
PNKP-215ENST00000600910 ATXN1P54253 815 aaKnown RBP21.32■■□□□ 1
PNKP-215ENST00000600910 CBX2Q14781 532 aaPredicted RBP21.32■■□□□ 1
PNKP-215ENST00000600910 POTEHQ6S545 545 aa21.32■■□□□ 1
PNKP-215ENST00000600910 STRADAQ7RTN6 431 aa21.32■■□□□ 1
PNKP-215ENST00000600910 DAAM2Q86T65 1068 aa21.32■■□□□ 1
PNKP-215ENST00000600910 HLA-CQ95604 372 aa21.32■■□□□ 1
PNKP-215ENST00000600910 PGAP3Q96FM1 320 aaPredicted RBP21.32■■□□□ 1
PNKP-215ENST00000600910 SERPINB11Q96P15 392 aa21.32■■□□□ 1
PNKP-215ENST00000600910 USTQ9Y2C2 406 aa21.32■■□□□ 1
PNKP-215ENST00000600910 USP15Q9Y4E8 981 aaPredicted RBP21.32■■□□□ 1
PNKP-215ENST00000600910 SOBPA7XYQ1 873 aa21.31■■□□□ 1
PNKP-215ENST00000600910 IRAK2O43187 625 aa21.31■■□□□ 1
PNKP-215ENST00000600910 PALMO75781 387 aa21.31■■□□□ 1
PNKP-215ENST00000600910 RNF8O76064 485 aa21.31■■□□□ 1
PNKP-215ENST00000600910 ENDOD1O94919 500 aa21.31■■□□□ 1
PNKP-215ENST00000600910 MBL2P11226 248 aaPredicted RBP21.31■■□□□ 1
PNKP-215ENST00000600910 GBP1P32455 592 aa21.31■■□□□ 1
PNKP-215ENST00000600910 HDAC4P56524 1084 aa21.31■■□□□ 1
PNKP-215ENST00000600910 DEUP1Q05D60 604 aa21.31■■□□□ 1
PNKP-215ENST00000600910 EIF4EBP2Q13542 120 aaPredicted RBP21.31■■□□□ 1
PNKP-215ENST00000600910 ACAP1Q15027 740 aa21.31■■□□□ 1
PNKP-215ENST00000600910 C11orf63Q6NUN7 778 aa21.31■■□□□ 1
PNKP-215ENST00000600910 CPNE8Q86YQ8 564 aa21.31■■□□□ 1
PNKP-215ENST00000600910 NPAS3Q8IXF0 933 aa21.31■■□□□ 1
PNKP-215ENST00000600910 CMTM8Q8IZV2 173 aa21.31■■□□□ 1
PNKP-215ENST00000600910 ARFGAP1Q8N6T3 406 aa21.31■■□□□ 1
PNKP-215ENST00000600910 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.31■■□□□ 1
PNKP-215ENST00000600910 FGF13Q92913 245 aa21.31■■□□□ 1
PNKP-215ENST00000600910 ZSWIM3Q96MP5 696 aa21.31■■□□□ 1
PNKP-215ENST00000600910 POMKQ9H5K3 350 aa21.31■■□□□ 1
PNKP-215ENST00000600910 PIGVQ9NUD9 493 aa21.31■■□□□ 1
PNKP-215ENST00000600910 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.31■■□□□ 11e-7■■■□□ 14.9
PNKP-215ENST00000600910 ZMYM5Q9UJ78 669 aa21.31■■□□□ 1
PNKP-215ENST00000600910 SLC12A8A0AV02 714 aa21.3■■□□□ 1
PNKP-215ENST00000600910 LRCH4O75427 683 aa21.3■■□□□ 1
PNKP-215ENST00000600910 F9P00740 461 aa21.3■■□□□ 1
PNKP-215ENST00000600910 MAN1A1P33908 653 aa21.3■■□□□ 1
PNKP-215ENST00000600910 RDXP35241 583 aaKnown RBP21.3■■□□□ 1
PNKP-215ENST00000600910 LRRC57Q8N9N7 239 aa21.3■■□□□ 1
PNKP-215ENST00000600910 SUSD6Q92537 303 aa21.3■■□□□ 1
PNKP-215ENST00000600910 NECTIN4Q96NY8 510 aa21.3■■□□□ 1
PNKP-215ENST00000600910 HYOU1Q9Y4L1 999 aa21.3■■□□□ 1
PNKP-215ENST00000600910 ALG6Q9Y672 507 aa21.3■■□□□ 1
PNKP-215ENST00000600910 GRXCR2A6NFK2 248 aa21.29■■□□□ 1
PNKP-215ENST00000600910 AVPR1AP37288 418 aa21.29■■□□□ 1
PNKP-215ENST00000600910 SLC7A9P82251 487 aa21.29■■□□□ 1
PNKP-215ENST00000600910 MAFAQ8NHW3 353 aaPredicted RBP21.29■■□□□ 1
PNKP-215ENST00000600910 ZFRQ96KR1 1074 aaKnown RBP21.29■■□□□ 1
PNKP-215ENST00000600910 SMPD4Q9NXE4 827 aa21.29■■□□□ 1
PNKP-215ENST00000600910 TLR6Q9Y2C9 796 aa21.29■■□□□ 1
PNKP-215ENST00000600910 CPQQ9Y646 472 aa21.29■■□□□ 1
PNKP-215ENST00000600910 HMBSP08397 361 aa21.29■■□□□ 1
PNKP-215ENST00000600910 COMTP21964 271 aa21.29■■□□□ 1
PNKP-215ENST00000600910 TBX4P57082 545 aa21.29■■□□□ 1
PNKP-215ENST00000600910 NNTQ13423 1086 aa21.29■■□□□ 1
PNKP-215ENST00000600910 TRIP4Q15650 581 aaPredicted RBP21.29■■□□□ 1
PNKP-215ENST00000600910 CC2D1AQ6P1N0 951 aaPredicted RBP21.29■■□□□ 1
PNKP-215ENST00000600910 SCYL2Q6P3W7 929 aa21.29■■□□□ 1
PNKP-215ENST00000600910 SND1Q7KZF4 910 aaKnown RBP eCLIP21.29■■□□□ 1
PNKP-215ENST00000600910 ZSCAN30Q86W11 494 aa21.29■■□□□ 1
PNKP-215ENST00000600910 FAM131BQ86XD5 332 aa21.29■■□□□ 1
PNKP-215ENST00000600910 ALS2CR12Q96Q35 445 aa21.29■■□□□ 1
PNKP-215ENST00000600910 KLF16Q9BXK1 252 aaPredicted RBP21.29■■□□□ 1
PNKP-215ENST00000600910 SMG9Q9H0W8 520 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms