RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 CD101Q93033 1021 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 RNF34Q969K3 372 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 LRRC3BQ96PB8 259 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 CPXM1Q96SM3 734 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 AGPAT1Q99943 283 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 P2RY13Q9BPV8 354 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 DDX23Q9BUQ8 820 aaKnown RBP8.04□□□□□ -1.12
FKRP-220ENST00000600646 IRX2Q9BZI1 471 aaPredicted RBP8.04□□□□□ -1.12
FKRP-220ENST00000600646 LTB4R2Q9NPC1 389 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 C11orf16Q9NQ32 467 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 SPHK2Q9NRA0 654 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.04□□□□□ -1.12
FKRP-220ENST00000600646 OSER1Q9NX31 292 aa8.04□□□□□ -1.12
FKRP-220ENST00000600646 AJAP1Q9UKB5 411 aaPredicted RBP8.04□□□□□ -1.12
FKRP-220ENST00000600646 TICRRQ7Z2Z1 1910 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 C5orf42Q9H799 3197 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 LRRC53A6NM62 1247 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 TRDMT1O14717 391 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 MDM4O15151 490 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 PAPSS1O43252 624 aaPredicted RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 LAMTOR5O43504 91 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 STC2O76061 302 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 F9P00740 461 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 PDGFBP01127 241 aaPredicted RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 APODP05090 189 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 ARSAP15289 507 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 ABCB4P21439 1286 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 CD72P21854 359 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 CORO1AP31146 461 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 NOS2P35228 1153 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 RPS9P46781 194 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 GABRB2P47870 512 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 RNASE9P60153 205 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 ZBED6P86452 979 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 KLHL30Q0D2K2 578 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 PON2Q15165 354 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 DHCR24Q15392 516 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 TDRD12Q587J7 1177 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 ACBD5Q5T8D3 534 aaPredicted RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 FAM102AQ5T9C2 384 aaPredicted RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 NAA35Q5VZE5 725 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 SPECC1LQ69YQ0 1117 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 FAM183BPQ6ZVS7 135 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 DENND1CQ8IV53 801 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 BBS7Q8IWZ6 715 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 WDTC1Q8N5D0 677 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 ATP6V0D2Q8N8Y2 350 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 CLEC4CQ8WTT0 213 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 CPA5Q8WXQ8 436 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 DDX1Q92499 740 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 NDRG1Q92597 394 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 SYN2Q92777 582 aaPredicted RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 AZIN2Q96A70 460 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 ZFRQ96KR1 1074 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 PNKPQ96T60 521 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 BBS2Q9BXC9 721 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 TRIM5Q9C035 493 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 XPO4Q9C0E2 1151 aaKnown RBP8.03□□□□□ -1.12
FKRP-220ENST00000600646 LINC00597Q9H2U6 94 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 FAM204AQ9H8W3 233 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 LMAN1LQ9HAT1 526 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 HPS4Q9NQG7 708 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.03□□□□□ -1.12
FKRP-220ENST00000600646 AIPL1Q9NZN9 384 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 ADAM22Q9P0K1 906 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 DEC1Q9P2X7 70 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 SFMBT1Q9UHJ3 866 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 TLR6Q9Y2C9 796 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 ITIH6Q6UXX5 1313 aa8.03□□□□□ -1.12
FKRP-220ENST00000600646 NEDD8-MDP1E9PL57 170 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 EPHB6O15197 1021 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 ZBTB24O43167 697 aaPredicted RBP8.02□□□□□ -1.13
FKRP-220ENST00000600646 IRAK2O43187 625 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 DAB1O75553 588 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 TRUB2O95900 331 aaKnown RBP8.02□□□□□ -1.13
FKRP-220ENST00000600646 ERBB2P04626 1255 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 CYP1A1P04798 512 aaPredicted RBP8.02□□□□□ -1.13
FKRP-220ENST00000600646 CYP17A1P05093 508 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 DCNP07585 359 aaKnown RBP8.02□□□□□ -1.13
FKRP-220ENST00000600646 TARSP26639 723 aaKnown RBP8.02□□□□□ -1.13
FKRP-220ENST00000600646 CCR1P32246 355 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 MATKP42679 507 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 SOX9P48436 509 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 PGFP49763 221 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 GALK1P51570 392 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 PTPN5P54829 565 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 NOMO3P69849 1222 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 ZXDBP98169 803 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 FMO1Q01740 532 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 CLEC16AQ2KHT3 1053 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 ARL13BQ3SXY8 428 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 PTPN20Q4JDL3 420 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 MPPE1Q53F39 396 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 TMEM196Q5HYL7 178 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 LY6G5CQ5SRR4 150 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 ADGRF1Q5T601 910 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 CWF19L1Q69YN2 538 aaKnown RBP8.02□□□□□ -1.13
FKRP-220ENST00000600646 SDE2Q6IQ49 451 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 RHBDF2Q6PJF5 856 aa8.02□□□□□ -1.13
FKRP-220ENST00000600646 TPGS1Q6ZTW0 290 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms