RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	STC2	O76061	302 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	APOE	P02649	317 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	CYBB	P04839	570 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	SERPING1	P05155	500 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	SLC2A3	P11169	496 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	ARSA	P15289	507 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	CHRNB2	P17787	502 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	CORO1A	P31146	461 aa	Known RBP	13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	CTH	P32929	405 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	PRKCI	P41743	596 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	GABRB2	P47870	512 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	TBX4	P57082	545 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	RNASE9	P60153	205 aa	Known RBP	13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	GAD2	Q05329	585 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	LRRC32	Q14392	662 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	TRIP4	Q15650	581 aa	Predicted RBP	13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	ANO4	Q32M45	955 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	ASTL	Q6HA08	431 aa	Predicted RBP	13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	OLFML1	Q6UWY5	402 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	MMS22L	Q6ZRQ5	1243 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	HFE2	Q6ZVN8	426 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	BHLHA9	Q7RTU4	235 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	IRF2BP2	Q7Z5L9	587 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	CNGA4	Q8IV77	575 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	VSTM4	Q8IW00	320 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	ADGRG2	Q8IZP9	1017 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	RNF34	Q969K3	372 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	OSBPL6	Q9BZF3	934 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	LINC00597	Q9H2U6	94 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	HAUS4	Q9H6D7	363 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	SFMBT1	Q9UHJ3	866 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	NAALADL1	Q9UQQ1	740 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	TLR6	Q9Y2C9	796 aa		13.57	□□□□□ -0.24
SRRM1-223	ENST00000600523	TYW5	A2RUC4	315 aa	Known RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	FAM170B	A6NMN3	283 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	GOLGA8S	H3BPF8	625 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	SCAMP3	O14828	347 aa	Known RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	DAB1	O75553	588 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	LATS1	O95835	1130 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	ADH5	P11766	374 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	UNG	P13051	313 aa	Predicted RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	MMP8	P22894	467 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	CASP14	P31944	242 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	NOS2	P35228	1153 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	MAGEA9	P43362	315 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	ZXDB	P98169	803 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	CENPC	Q03188	943 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	RING1	Q06587	406 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	C1QBP	Q07021	282 aa	Known RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	DHCR24	Q15392	516 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	PHF13	Q86YI8	300 aa	Predicted RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	DENND1C	Q8IV53	801 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	BBS7	Q8IWZ6	715 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	OR8K1	Q8NGG5	319 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	SLC30A5	Q8TAD4	765 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	DQX1	Q8TE96	717 aa	Known RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	TRIM11	Q96F44	468 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	XPO6	Q96QU8	1125 aa	Known RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	C11orf70	Q9BRQ4	267 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	LRFN3	Q9BTN0	628 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	RBSN	Q9H1K0	784 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	HPS4	Q9NQG7	708 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	NDRG2	Q9UN36	371 aa	Known RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	HELZ	P42694	1942 aa	Known RBP	13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	CUL9	Q8IWT3	2517 aa		13.56	□□□□□ -0.24
SRRM1-223	ENST00000600523	GRAP2	O75791	330 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	TRUB2	O95900	331 aa	Known RBP	13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	F9	P00740	461 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	GYPC	P04921	128 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	CYP17A1	P05093	508 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	GZMA	P12544	262 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	AOC1	P19801	751 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	CCR1	P32246	355 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	GJA4	P35212	333 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	MATK	P42679	507 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	DGKK	Q5KSL6	1271 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	ACAD10	Q6JQN1	1059 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	XYLT1	Q86Y38	959 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	DRC7	Q8IY82	874 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	DEFB106A	Q8N104	65 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	PJA1	Q8NG27	643 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	RIN3	Q8TB24	985 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	VCPIP1	Q96JH7	1222 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	SLC2A13	Q96QE2	648 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	PRRX2	Q99811	253 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	P2RY13	Q9BPV8	354 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	DDX23	Q9BUQ8	820 aa	Known RBP	13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	SELENOO	Q9BVL4	669 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	BBS2	Q9BXC9	721 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	DEF6	Q9H4E7	631 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	LTB4R2	Q9NPC1	389 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	SPHK2	Q9NRA0	654 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	DDIT4	Q9NX09	232 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	TJP2	Q9UDY2	1190 aa		13.55	□□□□□ -0.24
SRRM1-223	ENST00000600523	GOLGA6L6	A8MZA4	724 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 58 ms