RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 SETXQ7Z333 2677 aaKnown RBP16.94■□□□□ 0.3
LSM4-206ENST00000600289 PRR5-ARHGAP8B1AHC4 643 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 MDM4O15151 490 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 STC2O76061 302 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 ADH1CP00326 375 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 ATP1A3P13637 1013 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 DRD1P21728 446 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 TGM1P22735 817 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 JAM2P57087 298 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 ARHGAP8P85298 464 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 LMNB2Q03252 620 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 PDCLQ13371 301 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 RSRC2Q7L4I2 434 aaKnown RBP16.93■□□□□ 0.3
LSM4-206ENST00000600289 SLC47A2Q86VL8 602 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 BBS7Q8IWZ6 715 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 GPR161Q8N6U8 529 aaKnown RBP16.93■□□□□ 0.3
LSM4-206ENST00000600289 TTC16Q8NEE8 873 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 WBP2Q969T9 261 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 PLD4Q96BZ4 506 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 P2RY13Q9BPV8 354 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 DCLK3Q9C098 648 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 PRMT8Q9NR22 394 aaPredicted RBP16.93■□□□□ 0.3
LSM4-206ENST00000600289 MARCH2Q9P0N8 246 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 CYTH4Q9UIA0 394 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 RASAL2Q9UJF2 1139 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 NUDT5Q9UKK9 219 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 ZNF510Q9Y2H8 683 aa16.93■□□□□ 0.3
LSM4-206ENST00000600289 HOXC11O43248 304 aaPredicted RBP16.92■□□□□ 0.3
LSM4-206ENST00000600289 LTFP02788 710 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 PNMA6AP0CW24 399 aaPredicted RBP16.92■□□□□ 0.3
LSM4-206ENST00000600289 CYP11B1P15538 503 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 CDH5P33151 784 aaPredicted RBP16.92■□□□□ 0.3
LSM4-206ENST00000600289 KLK7P49862 253 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 EFEMP1Q12805 493 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 GRSF1Q12849 480 aaKnown RBP eCLIP16.92■□□□□ 0.3
LSM4-206ENST00000600289 SYCP1Q15431 976 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 ZNF528Q3MIS6 628 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 FSTL4Q6MZW2 842 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 RHBDF2Q6PJF5 856 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 WDTC1Q8N5D0 677 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 NDRG1Q92597 394 aaKnown RBP16.92■□□□□ 0.3
LSM4-206ENST00000600289 CD101Q93033 1021 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 TRIM62Q9BVG3 475 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 MARK1Q9P0L2 795 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 FBXO4Q9UKT5 387 aa16.92■□□□□ 0.3
LSM4-206ENST00000600289 HBS1LQ9Y450 684 aaKnown RBP16.92■□□□□ 0.3
LSM4-206ENST00000600289 EPHB6O15197 1021 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 PAPSS2O95340 614 aaPredicted RBP16.91■□□□□ 0.3
LSM4-206ENST00000600289 IRF1P10914 325 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 ADH5P11766 374 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 KRT9P35527 623 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 OPRD1P41143 372 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 UBXN1Q04323 297 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 GAD2Q05329 585 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 TRIP4Q15650 581 aaPredicted RBP16.91■□□□□ 0.3
LSM4-206ENST00000600289 ZSCAN23Q3MJ62 389 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 FBXO43Q4G163 708 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 ZNF677Q86XU0 584 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 MIB1Q86YT6 1006 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 CLEC4CQ8WTT0 213 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 RNF139Q8WU17 664 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 DDX1Q92499 740 aaKnown RBP16.91■□□□□ 0.3
LSM4-206ENST00000600289 GOLGA1Q92805 767 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 NOX5Q96PH1 765 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 SPHK2Q9NRA0 654 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 ST7Q9NRC1 585 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 FAM207AQ9NSI2 230 aaPredicted RBP16.91■□□□□ 0.3
LSM4-206ENST00000600289 SPATA6Q9NWH7 488 aaPredicted RBP16.91■□□□□ 0.3
LSM4-206ENST00000600289 ASNSD1Q9NWL6 643 aa16.91■□□□□ 0.3
LSM4-206ENST00000600289 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.9■□□□□ 0.3
LSM4-206ENST00000600289 E5RJQ4 531 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 PAPSS1O43252 624 aaPredicted RBP16.9■□□□□ 0.3
LSM4-206ENST00000600289 LATS1O95835 1130 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 FYNP06241 537 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 GALK1P51570 392 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 SNX16P57768 344 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 POLR2FP61218 127 aaKnown RBP16.9■□□□□ 0.3
LSM4-206ENST00000600289 MTAPQ13126 283 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 NNTQ13423 1086 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 GAS6Q14393 721 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 PPM1JQ5JR12 505 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 LY6G5CQ5SRR4 150 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 SCUBE3Q8IX30 993 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 ETFBKMTQ8IXQ9 262 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 FAM217AQ8IXS0 508 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 SPEM1Q8N4L4 309 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 EPS8L1Q8TE68 723 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 EDEM1Q92611 657 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 MIS12Q9H081 205 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
LSM4-206ENST00000600289 CEP83Q9Y592 693 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 WDFY3Q8IZQ1 3526 aa16.9■□□□□ 0.3
LSM4-206ENST00000600289 A0A0A0MRY4 1105 aa16.89■□□□□ 0.29
LSM4-206ENST00000600289 SLC12A8A0AV02 714 aa16.89■□□□□ 0.29
LSM4-206ENST00000600289 CHURC1-FNTBB4DL54 471 aa16.89■□□□□ 0.29
LSM4-206ENST00000600289 PIK3R2O00459 728 aa16.89■□□□□ 0.29
LSM4-206ENST00000600289 SCAMP3O14828 347 aaKnown RBP16.89■□□□□ 0.29
LSM4-206ENST00000600289 LAMTOR5O43504 91 aa16.89■□□□□ 0.29
LSM4-206ENST00000600289 LSM8O95777 96 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms