RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 MSI1O43347 362 aaKnown RBP14.47□□□□□ -0.09
UPF1-205ENST00000598209 CAVIN2O95810 425 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 FYNP06241 537 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 NCAM1P13591 858 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 CDH5P33151 784 aaPredicted RBP14.47□□□□□ -0.09
UPF1-205ENST00000598209 STAT1P42224 750 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 TPM4P67936 248 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 TRIP4Q15650 581 aaPredicted RBP14.47□□□□□ -0.09
UPF1-205ENST00000598209 ANO4Q32M45 955 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 TPGS1Q6ZTW0 290 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 DENND1CQ8IV53 801 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 MAML2Q8IZL2 1156 aaPredicted RBP14.47□□□□□ -0.09
UPF1-205ENST00000598209 TMEM35BQ8NCS4 154 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 ATOH1Q92858 354 aaPredicted RBP14.47□□□□□ -0.09
UPF1-205ENST00000598209 FAM86C1Q9NVL1 165 aa14.47□□□□□ -0.09
UPF1-205ENST00000598209 AGO1Q9UL18 857 aaKnown RBP14.47□□□□□ -0.09
UPF1-205ENST00000598209 A0A1B0GTH6 734 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 SERPINC1P01008 464 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 ERBB2P04626 1255 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 MMEP08473 750 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 EIF2DP41214 584 aaKnown RBP14.46□□□□□ -0.09
UPF1-205ENST00000598209 SLC6A11P48066 632 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 SNX16P57768 344 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 NFKBIBQ15653 356 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 FBXO43Q4G163 708 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 PTPN20Q4JDL3 420 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 OR6B2Q6IFH4 312 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 MAMSTRQ6ZN01 415 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 FAM183BPQ6ZVS7 135 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 ZNF677Q86XU0 584 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 SPEM1Q8N4L4 309 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 NAT16Q8N8M0 369 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 IPO4Q8TEX9 1081 aaKnown RBP14.46□□□□□ -0.09
UPF1-205ENST00000598209 SLC20A1Q8WUM9 679 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 EZH1Q92800 747 aaPredicted RBP14.46□□□□□ -0.09
UPF1-205ENST00000598209 FAM122AQ96E09 287 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 PIWIL1Q96J94 861 aaKnown RBP14.46□□□□□ -0.09
UPF1-205ENST00000598209 NAP1L5Q96NT1 182 aaPredicted RBP14.46□□□□□ -0.09
UPF1-205ENST00000598209 TRIM62Q9BVG3 475 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 BBS2Q9BXC9 721 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 SYNCQ9H7C4 482 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 PRMT8Q9NR22 394 aaPredicted RBP14.46□□□□□ -0.09
UPF1-205ENST00000598209 NOCTQ9UK39 431 aaKnown RBP14.46□□□□□ -0.09
UPF1-205ENST00000598209 FBXO4Q9UKT5 387 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 NAALADL1Q9UQQ1 740 aa14.46□□□□□ -0.09
UPF1-205ENST00000598209 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.45□□□□□ -0.1
UPF1-205ENST00000598209 NEDD8-MDP1E9PL57 170 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 GOLGA6L19H0YKK7 550 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 CAPN9O14815 690 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 RNF40O75150 1001 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 SP9P0CG40 484 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 PLA2G5P39877 138 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 HARS2P49590 506 aaKnown RBP14.45□□□□□ -0.1
UPF1-205ENST00000598209 CCR3P51677 355 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 YWHAZP63104 245 aaKnown RBP14.45□□□□□ -0.1
UPF1-205ENST00000598209 SATB1Q01826 763 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 CDR2Q01850 454 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 CSTF1Q05048 431 aaKnown RBP14.45□□□□□ -0.1
UPF1-205ENST00000598209 KDSRQ06136 332 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 TAF5Q15542 800 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 BEND5Q7L4P6 421 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 ETFBKMTQ8IXQ9 262 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 DQX1Q8TE96 717 aaKnown RBP14.45□□□□□ -0.1
UPF1-205ENST00000598209 PNKPQ96T60 521 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 POPDC2Q9HBU9 364 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 MARK1Q9P0L2 795 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 WDR35Q9P2L0 1181 aa14.45□□□□□ -0.1
UPF1-205ENST00000598209 FAM170AA1A519 330 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 TULP3O75386 442 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 LSM8O95777 96 aaKnown RBP14.44□□□□□ -0.1
UPF1-205ENST00000598209 IGLV3-27P01718 113 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 APODP05090 189 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 GLI1P08151 1106 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 TYRP14679 529 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 CHKAP35790 457 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 CXCL12P48061 93 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 TBX4P57082 545 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 NOMO3P69849 1222 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 FANCCQ00597 558 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 FMO1Q01740 532 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 MESP2Q0VG99 397 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 EFHC1Q5JVL4 640 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 SYPL2Q5VXT5 272 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 PKN3Q6P5Z2 889 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 TSSK4Q6SA08 328 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 OLFML1Q6UWY5 402 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 TAC4Q86UU9 113 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 CPXM2Q8N436 756 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 ADAM32Q8TC27 787 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 BHMTQ93088 406 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 SERPINB11Q96P15 392 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 XPO6Q96QU8 1125 aaKnown RBP14.44□□□□□ -0.1
UPF1-205ENST00000598209 ARHGEF4Q9NR80 690 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 ASNSD1Q9NWL6 643 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 DEC1Q9P2X7 70 aa14.44□□□□□ -0.1
UPF1-205ENST00000598209 A0A1W2PQC6 194 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 K7EQS6 105 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 CACNG3O60359 315 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 HSF2BPO75031 334 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms