RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 HELZ2Q9BYK8 2649 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 ADAMTS20P59510 1910 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 PLXNB3Q9ULL4 1909 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 KCNJ18B7U540 433 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 MDM4O15151 490 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 ZBTB24O43167 697 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 ACTN4O43707 911 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 PHACTR2O75167 634 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 NDUFS2O75306 463 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 ZNF699Q32M78 642 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 SYCP2LQ5T4T6 812 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 KIAA1324Q6UXG2 1013 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 CRYBG2Q8N1P7 616 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 C12orf29Q8N999 325 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 DNASE2BQ8WZ79 361 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 TOE1Q96GM8 510 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 PAGE5Q96GU1 130 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 TNIP3Q96KP6 325 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 C7orf25Q9BPX7 421 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 NMUR1Q9HB89 426 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 CYLDQ9NQC7 956 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 WSB2Q9NYS7 404 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 PLK2Q9NYY3 685 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 HOOK1Q9UJC3 728 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 PCDHB9Q9Y5E1 797 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 CABIN1Q9Y6J0 2220 aa17.35■□□□□ 0.37
SHKBP1-215ENST00000597649 FLNBO75369 2602 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 LRRIQ3A6PVS8 624 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 HHLA1C9JL84 531 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 GFRA2O00451 464 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 URB1O60287 2271 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 CD6P30203 668 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 ATP5C1P36542 298 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 DGKGP49619 791 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 SNRPFP62306 86 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 CLDN10P78369 228 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 BNC1Q01954 994 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 NCOA4Q13772 614 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 FUT11Q495W5 492 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 ZNF667Q5HYK9 610 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 Q6ZNB5 142 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 C12orf56Q8IXR9 622 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 ENGASEQ8NFI3 743 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 PARD3BQ8TEW8 1205 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 FOXJ1Q92949 421 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 TIGD1Q96MW7 591 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 MKRN2Q9H000 416 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 ITM2CQ9NQX7 267 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 TLR8Q9NR97 1041 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 PCOLCE2Q9UKZ9 415 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 SCML2Q9UQR0 700 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 STON1Q9Y6Q2 735 aa17.34■□□□□ 0.37
SHKBP1-215ENST00000597649 CYP26A1O43174 497 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 PTMSP20962 102 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 NDST1P52848 882 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 BIRC3Q13489 604 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 BMT2Q1RMZ1 405 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 COL28A1Q2UY09 1125 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 WDR45BQ5MNZ6 344 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 METTL3Q86U44 580 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 PDZD3Q86UT5 571 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 GRAMD1CQ8IYS0 662 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 MDM1Q8TC05 714 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 GPR174Q9BXC1 333 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 BLZF1Q9H2G9 400 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 FBXO44Q9H4M3 255 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 SLC39A2Q9NP94 309 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 FAM49BQ9NUQ9 324 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 USP36Q9P275 1121 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 SUSD2Q9UGT4 822 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 KALRNO60229 2985 aa17.33■□□□□ 0.36
SHKBP1-215ENST00000597649 GOLGA4Q13439 2230 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 UBE4BO95155 1302 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 A0A1W2PQH9 124 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 EXOC3O60645 756 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 KLKB1P03952 638 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 MYL1P05976 194 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 RARGP13631 454 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 GNSP15586 552 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 IL12RB1P42701 662 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 DLG4P78352 724 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 GEN1Q17RS7 908 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 UNC13DQ70J99 1090 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 SCD5Q86SK9 330 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 GLRX5Q86SX6 157 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 MARCH9Q86YJ5 346 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 ZCCHC9Q8N567 271 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 CCDC47Q96A33 483 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 TWNKQ96RR1 684 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 ZDHHC5Q9C0B5 715 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 CCDC86Q9H6F5 360 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 PRDM16Q9HAZ2 1276 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 TOR4AQ9NXH8 423 aa17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 LSM7Q9UK45 103 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-215ENST00000597649 A0A1B0GTW7 788 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 STC2O76061 302 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 MBD3O95983 291 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 NCAM1P13591 858 aa17.31■□□□□ 0.36
SHKBP1-215ENST00000597649 ACO1P21399 889 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms