RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 CCAR2Q8N163 923 aaKnown RBP15.67■□□□□ 0.1
TRIM28-207ENST00000597136 TXLNBQ8N3L3 684 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 BPIFB1Q8TDL5 484 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 IPO4Q8TEX9 1081 aaKnown RBP15.67■□□□□ 0.1
TRIM28-207ENST00000597136 EDAQ92838 391 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 ZNF653Q96CK0 615 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 ARHGEF26Q96DR7 871 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 TRMT61BQ9BVS5 477 aaKnown RBP15.67■□□□□ 0.1
TRIM28-207ENST00000597136 KLF16Q9BXK1 252 aaPredicted RBP15.67■□□□□ 0.1
TRIM28-207ENST00000597136 KCND1Q9NSA2 647 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 TRMT1Q9NXH9 659 aaKnown RBP15.67■□□□□ 0.1
TRIM28-207ENST00000597136 CLIC5Q9NZA1 410 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 STRIP2Q9ULQ0 834 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 ARHGAP26Q9UNA1 814 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 DUSP12Q9UNI6 340 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 DOCK4Q8N1I0 1966 aa15.67■□□□□ 0.1
TRIM28-207ENST00000597136 USP27XA6NNY8 438 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 ATMINO43313 823 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-207ENST00000597136 LTFP02788 710 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 SRFP11831 508 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 PFKLP17858 780 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 RRM1P23921 792 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 PSEN1P49768 467 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 FCHO2Q0JRZ9 810 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 EFEMP1Q12805 493 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 KIF5AQ12840 1032 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 ZNF77Q15935 545 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 TRIM68Q6AZZ1 485 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 ZNF662Q6ZS27 426 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 FAM183BPQ6ZVS7 135 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 PHLDB2Q86SQ0 1253 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 MIB1Q86YT6 1006 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 ZNF276Q8N554 614 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 E2F7Q96AV8 911 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 LINC00597Q9H2U6 94 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 OBP2AQ9NY56 170 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 CNOT8Q9UFF9 292 aaKnown RBP15.66■□□□□ 0.1
TRIM28-207ENST00000597136 SFMBT1Q9UHJ3 866 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 DUSP10Q9Y6W6 482 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 BTNL10A8MVZ5 291 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 GRAP2O75791 330 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 FBXO21O94952 628 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 IRF1P10914 325 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 RALAP11233 206 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 ARHGAP25P42331 645 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 GSCP56915 257 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-207ENST00000597136 TNK2Q07912 1038 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 SYPL2Q5VXT5 272 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 OR6B2Q6IFH4 312 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 PLEKHA7Q6IQ23 1121 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 C17orf53Q8N3J3 647 aaPredicted RBP15.66■□□□□ 0.1
TRIM28-207ENST00000597136 TTC8Q8TAM2 541 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 DEPDC1BQ8WUY9 529 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 IRGQQ8WZA9 623 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 TSGA10Q9BZW7 698 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 NACA2Q9H009 215 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 BRD9Q9H8M2 597 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 CFAP97Q9P2B7 532 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 WDR35Q9P2L0 1181 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 MYO1AQ9UBC5 1043 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 TRIM10Q9UDY6 481 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 NAALADL1Q9UQQ1 740 aa15.66■□□□□ 0.1
TRIM28-207ENST00000597136 ZNF318Q5VUA4 2279 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 TCRBV5S1A1TA0A578 114 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 ARNTLO00327 626 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 CCP110O43303 1012 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 USP4Q13107 963 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 MAMLD1Q13495 774 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 RSRC2Q7L4I2 434 aaKnown RBP15.65■□□□□ 0.1
TRIM28-207ENST00000597136 ZSCAN30Q86W11 494 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 ZDHHC17Q8IUH5 632 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 YAF2Q8IY57 180 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 UBALD2Q8IYN6 164 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 ARHGAP18Q8N392 663 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 C3orf20Q8ND61 904 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 RFFLQ8WZ73 363 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 FAM83CQ9BQN1 747 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 KIF9Q9HAQ2 790 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 LZTFL1Q9NQ48 299 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 SLC2A4RGQ9NR83 387 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 ABCC13Q9NSE7 274 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 PARVAQ9NVD7 372 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 GTSE1Q9NYZ3 720 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 RASAL2Q9UJF2 1139 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 DNMT3LQ9UJW3 386 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 WNT6Q9Y6F9 365 aa15.65■□□□□ 0.1
TRIM28-207ENST00000597136 KIAA1549LQ6ZVL6 1849 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 A0A0A6YYK5 440 aaPredicted RBP15.64■□□□□ 0.09
TRIM28-207ENST00000597136 KRBA1A5PL33 1030 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 OTOL1A6NHN0 477 aaPredicted RBP15.64■□□□□ 0.09
TRIM28-207ENST00000597136 GOLGA8SH3BPF8 625 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 KRT86O43790 486 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 PDGFBP01127 241 aaPredicted RBP15.64■□□□□ 0.09
TRIM28-207ENST00000597136 HMBSP08397 361 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 ALADP13716 330 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 TCF3P15923 654 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 PITX1P78337 314 aaPredicted RBP15.64■□□□□ 0.09
TRIM28-207ENST00000597136 SLC6A3Q01959 620 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 TCEAL1Q15170 157 aa15.64■□□□□ 0.09
TRIM28-207ENST00000597136 ARHGAP29Q52LW3 1261 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms